This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gwp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_3gwp", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
Current revision (14:56, 20 September 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3gwp.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of carbon-sulfur lyase involved in aluminum resistance (YP_878183.1) from CLOSTRIDIUM NOVYI NT at 2.90 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3gwp", creates the "Structure Box" on the page.
+
<StructureSection load='3gwp' size='340' side='right'caption='[[3gwp]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3gwp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_novyi_NT Clostridium novyi NT]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GWP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GWP FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3gwp| PDB=3gwp | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gwp OCA], [https://pdbe.org/3gwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gwp RCSB], [https://www.ebi.ac.uk/pdbsum/3gwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gwp ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of carbon-sulfur lyase involved in aluminum resistance (YP_878183.1) from CLOSTRIDIUM NOVYI NT at 2.90 A resolution===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A0Q0N1_CLONN A0Q0N1_CLONN]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3GWP is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Clostridium_novyi_nt Clostridium novyi nt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GWP OCA].
+
Check<jmol>
-
[[Category: Clostridium novyi nt]]
+
<jmolCheckbox>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gw/3gwp_consurf.spt"</scriptWhenChecked>
-
[[Category: Carbon-sulfur lyase involved in aluminum resistance]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Jcsg]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joint center for structural genomic]]
+
</jmolCheckbox>
-
[[Category: Protein structure initiative]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gwp ConSurf].
-
[[Category: Psi-2]]
+
<div style="clear:both"></div>
-
[[Category: Structural genomic]]
+
__TOC__
-
[[Category: Yp_878183 1]]
+
</StructureSection>
-
 
+
[[Category: Clostridium novyi NT]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 15 10:38:52 2009''
+
[[Category: Large Structures]]

Current revision

Crystal structure of carbon-sulfur lyase involved in aluminum resistance (YP_878183.1) from CLOSTRIDIUM NOVYI NT at 2.90 A resolution

PDB ID 3gwp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools