2hpl

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{{Seed}}
 
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[[Image:2hpl.png|left|200px]]
 
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==Crystal structure of the mouse p97/PNGase complex==
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The line below this paragraph, containing "STRUCTURE_2hpl", creates the "Structure Box" on the page.
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<StructureSection load='2hpl' size='340' side='right'caption='[[2hpl]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2hpl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HPL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HPL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hpl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hpl OCA], [https://pdbe.org/2hpl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hpl RCSB], [https://www.ebi.ac.uk/pdbsum/2hpl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hpl ProSAT]</span></td></tr>
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{{STRUCTURE_2hpl| PDB=2hpl | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/NGLY1_MOUSE NGLY1_MOUSE] Specifically deglycosylates the denatured form of N-linked glycoproteins in the cytoplasm and assists their proteasome-mediated degradation. Cleaves the beta-aspartyl-glucosamine (GlcNAc) of the glycan and the amide side chain of Asn, converting Asn to Asp. Prefers proteins containing high-mannose over those bearing complex type oligosaccharides. Can recognize misfolded proteins in the endoplasmic reticulum that are exported to the cytosol to be destroyed and deglycosylate them, while it has no activity toward native proteins. Deglycosylation is a prerequisite for subsequent proteasome-mediated degradation of some, but not all, misfolded glycoproteins.<ref>PMID:11562482</ref> <ref>PMID:12606569</ref> <ref>PMID:15358861</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hp/2hpl_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hpl ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of the mouse p97/PNGase complex===
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==See Also==
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*[[Peptide N-glycanase|Peptide N-glycanase]]
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== References ==
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<references/>
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 17496150 is the PubMed ID number.
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</StructureSection>
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[[Category: Large Structures]]
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{{ABSTRACT_PUBMED_17496150}}
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==About this Structure==
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2HPL is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HPL OCA].
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==Reference==
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<ref group="xtra">PMID:17496150</ref><references group="xtra"/>
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[[Category: Mus musculus]]
[[Category: Mus musculus]]
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[[Category: Lennarz, W.]]
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[[Category: Lennarz W]]
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[[Category: Li, G.]]
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[[Category: Li G]]
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[[Category: Schindelin, H.]]
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[[Category: Schindelin H]]
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[[Category: Wang, L.]]
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[[Category: Wang L]]
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[[Category: Zhao, G.]]
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[[Category: Zhao G]]
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[[Category: Zhou, X.]]
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[[Category: Zhou X]]
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[[Category: Hydrolase]]
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[[Category: P97]]
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[[Category: Pub domain]]
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[[Category: Winged helix]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Apr 19 08:20:32 2009''
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Current revision

Crystal structure of the mouse p97/PNGase complex

PDB ID 2hpl

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OCA

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