2qt2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:35, 30 October 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qt2.jpg|left|200px]]
 
-
<!--
+
==Cyclized-Dehydrated Intermediate of GFP Variant Q183E in Chromophore Maturation==
-
The line below this paragraph, containing "STRUCTURE_2qt2", creates the "Structure Box" on the page.
+
<StructureSection load='2qt2' size='340' side='right'caption='[[2qt2]], [[Resolution|resolution]] 1.31&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qt2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QT2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.31&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CJO:[(2R,4R)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYL)-5-OXOIMIDAZOLIDIN-1-YL]ACETIC+ACID'>CJO</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
{{STRUCTURE_2qt2| PDB=2qt2 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qt2 OCA], [https://pdbe.org/2qt2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qt2 RCSB], [https://www.ebi.ac.uk/pdbsum/2qt2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qt2 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qt/2qt2_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qt2 ConSurf].
 +
<div style="clear:both"></div>
-
===Cyclized-Dehydrated Intermediate of GFP Variant Q183E in Chromophore Maturation===
+
==See Also==
-
 
+
*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2QT2 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QT2 OCA].
+
[[Category: Aequorea victoria]]
[[Category: Aequorea victoria]]
-
[[Category: Barondeau, D P.]]
+
[[Category: Large Structures]]
-
[[Category: Getzoff, E D.]]
+
[[Category: Barondeau DP]]
-
[[Category: Hitomi, C.]]
+
[[Category: Getzoff ED]]
-
[[Category: Tainer, J A.]]
+
[[Category: Hitomi C]]
-
[[Category: Wood, T I.]]
+
[[Category: Tainer JA]]
-
[[Category: Chromophore]]
+
[[Category: Wood TI]]
-
[[Category: Chromophore maturation]]
+
-
[[Category: Cyclized]]
+
-
[[Category: Dehydrated intermediate]]
+
-
[[Category: Fluorescent protein]]
+
-
[[Category: Gfp]]
+
-
[[Category: Luminescence]]
+
-
[[Category: Photoprotein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 22 11:24:04 2009''
+

Current revision

Cyclized-Dehydrated Intermediate of GFP Variant Q183E in Chromophore Maturation

PDB ID 2qt2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools