This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2wgl
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 2wgl is ON HOLD Authors: FONG, Y.H., Chen, Y.W., Wong, K.B. Description: Crystal structure of Helicobactor pylori UreF ''Page seeded by [http://oc...) |
|||
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of Helicobactor pylori UreF== | |
| + | <StructureSection load='2wgl' size='340' side='right'caption='[[2wgl]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2wgl]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WGL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WGL FirstGlance]. <br> | ||
| + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wgl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wgl OCA], [https://pdbe.org/2wgl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wgl RCSB], [https://www.ebi.ac.uk/pdbsum/2wgl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wgl ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/UREF_HELPY UREF_HELPY]] Required for maturation of urease via the functional incorporation of the urease nickel metallocenter (By similarity).[HAMAP-Rule:MF_01385] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wg/2wgl_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wgl ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| - | + | *[[Urease accessory protein|Urease accessory protein]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Helicobacter pylori]] | |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Chen, Y W]] | ||
| + | [[Category: Fong, Y H]] | ||
| + | [[Category: Wong, K B]] | ||
| + | [[Category: Chaperone]] | ||
| + | [[Category: Cytoplasm]] | ||
| + | [[Category: Metal binding protein]] | ||
| + | [[Category: Nickel insertion]] | ||
| + | [[Category: Virulence]] | ||
Current revision
Crystal structure of Helicobactor pylori UreF
| |||||||||||
