3h5q
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3h5q is ON HOLD Authors: Shumilin, I.A., Zimmerman, M., Cymborowski, M., Skarina, T., Onopriyenko, O., Anderson, W.F., Savchenko, A., Minor, W., Cen...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of a putative pyrimidine-nucleoside phosphorylase from Staphylococcus aureus== | |
| - | + | <StructureSection load='3h5q' size='340' side='right'caption='[[3h5q]], [[Resolution|resolution]] 1.94Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3h5q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_COL Staphylococcus aureus subsp. aureus COL]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H5Q FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=THM:THYMIDINE'>THM</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h5q OCA], [https://pdbe.org/3h5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h5q RCSB], [https://www.ebi.ac.uk/pdbsum/3h5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h5q ProSAT], [https://www.topsan.org/Proteins/CSGID/3h5q TOPSAN]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PDP_STAAC PDP_STAAC] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/3h5q_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h5q ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Staphylococcus aureus subsp. aureus COL]] | ||
| + | [[Category: Anderson WF]] | ||
| + | [[Category: Cymborowski M]] | ||
| + | [[Category: Minor W]] | ||
| + | [[Category: Onopriyenko O]] | ||
| + | [[Category: Savchenko A]] | ||
| + | [[Category: Shumilin IA]] | ||
| + | [[Category: Skarina T]] | ||
| + | [[Category: Zimmerman M]] | ||
Current revision
Crystal structure of a putative pyrimidine-nucleoside phosphorylase from Staphylococcus aureus
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