3fi7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:25, 20 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3fi7.png|left|200px]]
 
-
<!--
+
==Crystal Structure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain==
-
The line below this paragraph, containing "STRUCTURE_3fi7", creates the "Structure Box" on the page.
+
<StructureSection load='3fi7' size='340' side='right'caption='[[3fi7]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3fi7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FI7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FI7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3fi7| PDB=3fi7 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fi7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fi7 OCA], [https://pdbe.org/3fi7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fi7 RCSB], [https://www.ebi.ac.uk/pdbsum/3fi7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fi7 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8Y842_LISMO Q8Y842_LISMO]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_19210622}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19210622 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/3fi7_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_19210622}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
3FI7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Undefined,_listeria_monocytogenes Undefined, listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FI7 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fi7 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:19210622</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase]]
+
[[Category: Large Structures]]
-
[[Category: Undefined, listeria monocytogenes]]
+
[[Category: Listeria monocytogenes EGD-e]]
-
[[Category: Bublitz, M.]]
+
[[Category: Bublitz M]]
-
[[Category: Heinz, D W.]]
+
[[Category: Heinz DW]]
-
[[Category: Holland, C.]]
+
[[Category: Holland C]]
-
[[Category: Nimtz, M.]]
+
[[Category: Nimtz M]]
-
[[Category: Polle, L.]]
+
[[Category: Polle L]]
-
[[Category: Schubert, W D.]]
+
[[Category: Schubert WD]]
-
[[Category: Autoinhibition]]
+
-
[[Category: Autolysin]]
+
-
[[Category: Gh73]]
+
-
[[Category: Listeria monocytogene]]
+
-
[[Category: N acetylglucosaminidase]]
+
-
[[Category: Peptidoglycan hydrolase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 6 10:25:24 2009''
+

Current revision

Crystal Structure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain

PDB ID 3fi7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3fi7"
Personal tools