2zv3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:56, 1 November 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2zv3.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of project MJ0051 from Methanocaldococcus jannaschii DSM 2661==
-
The line below this paragraph, containing "STRUCTURE_2zv3", creates the "Structure Box" on the page.
+
<StructureSection load='2zv3' size='340' side='right'caption='[[2zv3]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2zv3]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZV3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zv3 OCA], [https://pdbe.org/2zv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zv3 RCSB], [https://www.ebi.ac.uk/pdbsum/2zv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zv3 ProSAT]</span></td></tr>
-
{{STRUCTURE_2zv3| PDB=2zv3 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PTH_METJA PTH_METJA] The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis (By similarity).<ref>PMID:12475929</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zv/2zv3_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zv3 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of project MJ0051 from Methanocaldococcus jannaschii DSM 2661===
+
==See Also==
-
 
+
*[[Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
2ZV3 is a 9 chains structure of sequences from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZV3 OCA].
+
__TOC__
-
[[Category: Aminoacyl-tRNA hydrolase]]
+
</StructureSection>
-
[[Category: Methanocaldococcus jannaschii]]
+
[[Category: Large Structures]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Methanocaldococcus jannaschii DSM 2661]]
-
[[Category: Shimizu, K.]]
+
[[Category: Shimizu K]]
-
[[Category: Cytoplasm]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 6 11:24:54 2009''
+

Current revision

Crystal structure of project MJ0051 from Methanocaldococcus jannaschii DSM 2661

PDB ID 2zv3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools