This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3h7g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:48, 1 November 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3h7g is ON HOLD
+
==Apo-FR with AU ions==
 +
<StructureSection load='3h7g' size='340' side='right'caption='[[3h7g]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3h7g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H7G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H7G FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AU3:GOLD+3++ION'>AU3</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h7g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h7g OCA], [https://pdbe.org/3h7g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h7g RCSB], [https://www.ebi.ac.uk/pdbsum/3h7g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h7g ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FRIL_HORSE FRIL_HORSE] Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h7/3h7g_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h7g ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
We have succeeded in preparing Au/Pd core-shell nanoparticles in apo-ferritin and improving the catalytic reactivity of olefin hydrogenation relative to Pd0 nanoparticles in the cage.
-
Authors: Abe, M., Ueno, T., Abe, S., Suzuki, M., Goto, T., Toda, Y., Akita, T., Yamada, Y., Watanabe, Y.
+
Preparation and catalytic reaction of Au/Pd bimetallic nanoparticles in apo-ferritin.,Suzuki M, Abe M, Ueno T, Abe S, Goto T, Toda Y, Akita T, Yamada Y, Watanabe Y Chem Commun (Camb). 2009 Aug 28;(32):4871-3. Epub 2009 Jul 3. PMID:19652809<ref>PMID:19652809</ref>
-
Description: Apo-FR with AU ions
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 3h7g" style="background-color:#fffaf0;"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 13 09:35:45 2009''
+
==See Also==
 +
*[[Ferritin 3D structures|Ferritin 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Equus caballus]]
 +
[[Category: Large Structures]]
 +
[[Category: Abe M]]
 +
[[Category: Abe S]]
 +
[[Category: Akita T]]
 +
[[Category: Goto T]]
 +
[[Category: Suzuki M]]
 +
[[Category: Toda Y]]
 +
[[Category: Ueno T]]
 +
[[Category: Watanabe Y]]
 +
[[Category: Yamada Y]]

Current revision

Apo-FR with AU ions

PDB ID 3h7g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3h7g"
Personal tools