This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2e7k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:48, 29 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2e7k.png|left|200px]]
 
-
<!--
+
==Solution structure of the PDZ domain from Human MAGUK p55 subfamily member 2==
-
The line below this paragraph, containing "STRUCTURE_2e7k", creates the "Structure Box" on the page.
+
<StructureSection load='2e7k' size='340' side='right'caption='[[2e7k]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2e7k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E7K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E7K FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e7k OCA], [https://pdbe.org/2e7k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e7k RCSB], [https://www.ebi.ac.uk/pdbsum/2e7k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e7k ProSAT], [https://www.topsan.org/Proteins/RSGI/2e7k TOPSAN]</span></td></tr>
-
{{STRUCTURE_2e7k| PDB=2e7k | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Solution structure of the PDZ domain from Human MAGUK p55 subfamily member 2===
+
[https://www.uniprot.org/uniprot/MPP2_HUMAN MPP2_HUMAN]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2E7K is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E7K OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e7/2e7k_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e7k ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Hayashi, F.]]
+
[[Category: Large Structures]]
-
[[Category: Kurosaki, C.]]
+
[[Category: Hayashi F]]
-
[[Category: Qin, X R.]]
+
[[Category: Kurosaki C]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Qin XR]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yoshida, M.]]
+
[[Category: Yoshida M]]
-
[[Category: Discs large homolog 2]]
+
-
[[Category: Maguk p55 subfamily member 2]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Mpp2 protein]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Pdz domain]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 13 11:11:52 2009''
+

Current revision

Solution structure of the PDZ domain from Human MAGUK p55 subfamily member 2

PDB ID 2e7k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools