This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2eqj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:54, 29 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2eqj.png|left|200px]]
 
-
<!--
+
==Solution structure of the TUDOR domain of Metal-response element-binding transcription factor 2==
-
The line below this paragraph, containing "STRUCTURE_2eqj", creates the "Structure Box" on the page.
+
<StructureSection load='2eqj' size='340' side='right'caption='[[2eqj]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2eqj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EQJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eqj OCA], [https://pdbe.org/2eqj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eqj RCSB], [https://www.ebi.ac.uk/pdbsum/2eqj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eqj ProSAT]</span></td></tr>
-
{{STRUCTURE_2eqj| PDB=2eqj | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Solution structure of the TUDOR domain of Metal-response element-binding transcription factor 2===
+
[https://www.uniprot.org/uniprot/MTF2_MOUSE MTF2_MOUSE] Binds to the metal-regulating-element (MRE) of metallothionein-1A gene promoter. Binding is zinc-dependent.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2EQJ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQJ OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/2eqj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eqj ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Dang, W.]]
+
[[Category: Dang W]]
-
[[Category: Isono, K.]]
+
[[Category: Isono K]]
-
[[Category: Kigawa, T.]]
+
[[Category: Kigawa T]]
-
[[Category: Koseki, H.]]
+
[[Category: Koseki H]]
-
[[Category: Muto, Y.]]
+
[[Category: Muto Y]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Tarada T]]
-
[[Category: Tarada, T.]]
+
[[Category: Watanabe S]]
-
[[Category: Watanabe, S.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Metal-regulatory transcription factor 2]]
+
-
[[Category: Metal-response element dna-binding protein m96]]
+
-
[[Category: Metal-response element-binding transcription factor 2]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nmr]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Pcl2]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structure genomic]]
+
-
[[Category: Tudor domain]]
+
-
[[Category: Zinc-regulated factor 1]]
+
-
[[Category: Zirf1]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 13 11:37:36 2009''
+

Current revision

Solution structure of the TUDOR domain of Metal-response element-binding transcription factor 2

PDB ID 2eqj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2eqj"
Personal tools