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3h9x

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{{Seed}}
 
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[[Image:3h9x.jpg|left|200px]]
 
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==Crystal Structure of the PSPTO_3016 protein from Pseudomonas syringae, Northeast Structural Genomics Consortium Target PsR293==
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The line below this paragraph, containing "STRUCTURE_3h9x", creates the "Structure Box" on the page.
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<StructureSection load='3h9x' size='340' side='right'caption='[[3h9x]], [[Resolution|resolution]] 2.51&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3h9x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"pseudomonas_tomato"_(okabe_1933)_alstatt_1944 "pseudomonas tomato" (okabe 1933) alstatt 1944]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H9X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H9X FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PSPTO3016, PSPTO_3016 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=323 "Pseudomonas tomato" (Okabe 1933) Alstatt 1944])</td></tr>
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{{STRUCTURE_3h9x| PDB=3h9x | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h9x OCA], [https://pdbe.org/3h9x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h9x RCSB], [https://www.ebi.ac.uk/pdbsum/3h9x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h9x ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h9/3h9x_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h9x ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The protein Pspto_3016 is a 117-residue member of the protein domain family PF04237 (DUF419), which is to date a functionally uncharacterized family of proteins. In this report, we describe the structure of Pspto_3016 from Pseudomonas syringae solved by both solution NMR and X-ray crystallography at 2.5 A resolution. In both cases, the structure of Pspto_3016 adopts a "double wing" alpha/beta sandwich fold similar to that of protein YjbR from Escherichia coli and to the C-terminal DNA binding domain of the MotA transcription factor (MotCF) from T4 bacteriophage, along with other uncharacterized proteins. Pspto_3016 was selected by the Protein Structure Initiative of the National Institutes of Health and the Northeast Structural Genomics Consortium (NESG ID PsR293).
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===Crystal Structure of the PSPTO_3016 protein from Pseudomonas syringae, Northeast Structural Genomics Consortium Target PsR293===
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Solution NMR and X-ray crystal structures of Pseudomonas syringae Pspto_3016 from protein domain family PF04237 (DUF419) adopt a "double wing" DNA binding motif.,Feldmann EA, Seetharaman J, Ramelot TA, Lew S, Zhao L, Hamilton K, Ciccosanti C, Xiao R, Acton TB, Everett JK, Tong L, Montelione GT, Kennedy MA J Struct Funct Genomics. 2012 Sep;13(3):155-62. Epub 2012 Aug 3. PMID:22865330<ref>PMID:22865330</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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==About this Structure==
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</div>
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3H9X is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato Pseudomonas syringae pv. tomato]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H9X OCA].
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<div class="pdbe-citations 3h9x" style="background-color:#fffaf0;"></div>
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[[Category: Pseudomonas syringae pv. tomato]]
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== References ==
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[[Category: Acton, T B.]]
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<references/>
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[[Category: Ciccosanti,C.]]
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__TOC__
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[[Category: Everett, J K.]]
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</StructureSection>
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[[Category: Foote,E L.]]
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[[Category: Large Structures]]
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[[Category: Forouhar,F.]]
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[[Category: Acton, T B]]
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[[Category: Hamilton,H.]]
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[[Category: Ciccosanti, C]]
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[[Category: Hunt,J F.]]
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[[Category: Everett, J K]]
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[[Category: Lew, S.]]
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[[Category: Foote, E L]]
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[[Category: Montelione, G T.]]
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[[Category: Forouhar, F]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Hamilton, H]]
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[[Category: Nair, R.]]
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[[Category: Hunt, J F]]
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[[Category: Rost, B.]]
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[[Category: Lew, S]]
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[[Category: Seetharaman, J.]]
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[[Category: Montelione, G T]]
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[[Category: Tong,L.]]
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[[Category: Structural genomic]]
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[[Category: Xiao,R.]]
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[[Category: Nair, R]]
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[[Category: Zhao,L.]]
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[[Category: Rost, B]]
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[[Category: Alpha-beta protein.]]
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[[Category: Seetharaman, J]]
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[[Category: Tong, L]]
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[[Category: Xiao, R]]
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[[Category: Zhao, L]]
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[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Unknown function]]
[[Category: Unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 20 18:07:19 2009''
 

Current revision

Crystal Structure of the PSPTO_3016 protein from Pseudomonas syringae, Northeast Structural Genomics Consortium Target PsR293

PDB ID 3h9x

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