3hdg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:59, 9 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3hdg.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the N-terminal domain of an uncharacterized protein (WS1339) from Wolinella succinogenes==
-
The line below this paragraph, containing "STRUCTURE_3hdg", creates the "Structure Box" on the page.
+
<StructureSection load='3hdg' size='340' side='right'caption='[[3hdg]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HDG FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.27&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3hdg| PDB=3hdg | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hdg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdg OCA], [https://pdbe.org/3hdg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hdg RCSB], [https://www.ebi.ac.uk/pdbsum/3hdg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hdg ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3hdg TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the N-terminal domain of an uncharacterized protein (WS1339) from Wolinella succinogenes===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
3HDG is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Wolinella_succinogenes Wolinella succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDG OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/3hdg_consurf.spt"</scriptWhenChecked>
-
[[Category: Wolinella succinogenes]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Burley, S K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Eswaramoorthy, S.]]
+
</jmolCheckbox>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hdg ConSurf].
-
[[Category: Swaminathan, S.]]
+
<div style="clear:both"></div>
-
[[Category: 11227f]]
+
__TOC__
-
[[Category: New york sgx research center for structural genomic]]
+
</StructureSection>
-
[[Category: Nysgxrc]]
+
[[Category: Large Structures]]
-
[[Category: Protein structure initiative]]
+
[[Category: Burley SK]]
-
[[Category: Psi-ii]]
+
[[Category: Eswaramoorthy S]]
-
[[Category: Response regulator]]
+
[[Category: Swaminathan S]]
-
[[Category: Structural genomic]]
+
-
[[Category: Two-component sensor activity]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 20 18:08:32 2009''
+

Current revision

Crystal structure of the N-terminal domain of an uncharacterized protein (WS1339) from Wolinella succinogenes

PDB ID 3hdg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools