3hdt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:57, 6 November 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3hdt.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of putative kinase from Clostridium symbiosum ATCC 14940==
-
The line below this paragraph, containing "STRUCTURE_3hdt", creates the "Structure Box" on the page.
+
<StructureSection load='3hdt' size='340' side='right'caption='[[3hdt]], [[Resolution|resolution]] 2.79&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3hdt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_symbiosum_ATCC_14940 Clostridium symbiosum ATCC 14940]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HDT FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.79&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_3hdt| PDB=3hdt | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hdt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdt OCA], [https://pdbe.org/3hdt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hdt RCSB], [https://www.ebi.ac.uk/pdbsum/3hdt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hdt ProSAT], [https://www.topsan.org/Proteins/MCSG/3hdt TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of putative kinase from Clostridium symbiosum ATCC 14940===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
3HDT is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Clostridium_symbiosum_atcc_14940 Clostridium symbiosum atcc 14940]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDT OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/3hdt_consurf.spt"</scriptWhenChecked>
-
[[Category: Clostridium symbiosum atcc 14940]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Chang, C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Freeman, L.]]
+
</jmolCheckbox>
-
[[Category: Jedrzejczak, R.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hdt ConSurf].
-
[[Category: Joachimiak, A.]]
+
<div style="clear:both"></div>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
__TOC__
-
[[Category: Clostridium symbiosum atcc 14940]]
+
</StructureSection>
-
[[Category: Mcsg]]
+
[[Category: Large Structures]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Chang C]]
-
[[Category: Protein structure initiative]]
+
[[Category: Freeman L]]
-
[[Category: Psi-2]]
+
[[Category: Jedrzejczak R]]
-
[[Category: Putative kinase]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 27 15:30:09 2009''
+

Current revision

Crystal structure of putative kinase from Clostridium symbiosum ATCC 14940

PDB ID 3hdt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools