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Template:STRUCTURE 1hfe

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Current revision

1hfe, resolution 1.60Å ()

Ligands:

, , , , , ,

Activity:

Ferredoxin hydrogenase, with EC number 1.12.7.2

Structural annotation:
Resources:	CATH : 1Hfel01, 1Hfel03, 1Hfel02, 1Hfem01, 1Hfem03, 1Hfem02, 1Hfes00, 1Hfet00 InterPro : Ipr017900, Ipr004108, Ipr017896, Ipr013352, Ipr009016, Ipr006311, Ipr008953, Ipr003149, Ipr017909 Pfam : PF00037, PF02906, PF02256 SCOP : d1hfel1, d1hfel2, d1hfem2, d1hfem1, d1hfes_, d1hfet_ UniProt : P07598, P07603

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

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OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1hfe"

@@ Line 1: / Line 1: @@
 {{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1hfe]], [[Resolution | resolution]] 1.60&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1hfe]], [[Resolution|resolution]] 1.60&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Fe2+L+426'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Fe2+L+427'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Cyn+L+428'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Cyn+L+429'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Fe2+M+426'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Fe2+M+427'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Cyn+M+428'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Cyn+M+429'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Zn+S+500'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Sf4+L+422'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Sf4+L+423'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Sf4+L+424'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Pdt+L+425'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Cmo+L+430'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Cmo+L+431'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Sf4+M+422'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Sf4+M+423'>BC8</scene>, <scene name='pdbsite=BC9:Binding+Site+For+Residue+Sf4+M+424'>BC9</scene>, <scene name='pdbsite=CC1:Binding+Site+For+Residue+Pdt+M+425'>CC1</scene>, <scene name='pdbsite=CC2:Binding+Site+For+Residue+Cmo+M+430'>CC2</scene>, <scene name='pdbsite=CC3:Binding+Site+For+Residue+Cmo+M+431'>CC3</scene>, <scene name='pdbsite=CC4:Binding+Site+For+Residue+CYS+L+432'>CC4</scene> and <scene name='pdbsite=CC5:Binding+Site+For+Residue+CYS+M+433'>CC5</scene>
 |LIGAND= <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=PDT:1,3-PROPANEDITHIOL'>PDT</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
 |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin_hydrogenase Ferredoxin hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.7.2 1.12.7.2] </span>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hfe OCA], [http://www.ebi.ac.uk/pdbsum/1hfe PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1hfe RCSB]</span>
+|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hfe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1hfe RCSB], [http://www.ebi.ac.uk/pdbsum/1hfe PDBsum]</span>
-|FUNCTION={{GO|id=GO:0051539 | text = 4 iron, 4 sulfur cluster binding}}{{GO|id=GO:0008901 | text = ferredoxin hydrogenase activity}}{{GO|id=GO:0051536 | text = iron-sulfur cluster binding}}{{GO|id=GO:0009055 | text = electron carrier activity}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0005506 | text = iron ion binding}}
+|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1hfeL01 1Hfel01], [http://www.cathdb.info/domain/1hfeL03 1Hfel03], [http://www.cathdb.info/domain/1hfeL02 1Hfel02], [http://www.cathdb.info/domain/1hfeM01 1Hfem01], [http://www.cathdb.info/domain/1hfeM03 1Hfem03], [http://www.cathdb.info/domain/1hfeM02 1Hfem02], [http://www.cathdb.info/domain/1hfeS00 1Hfes00], [http://www.cathdb.info/domain/1hfeT00 1Hfet00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017900 Ipr017900], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004108 Ipr004108], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017896 Ipr017896], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013352 Ipr013352], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009016 Ipr009016], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006311 Ipr006311], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008953 Ipr008953], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003149 Ipr003149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017909 Ipr017909]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00037 PF00037], [http://pfam.sanger.ac.uk/family?acc=PF02906 PF02906], [http://pfam.sanger.ac.uk/family?acc=PF02256 PF02256]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36018 d1hfel1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39001 d1hfel2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39002 d1hfem2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36019 d1hfem1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19640 d1hfes_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19641 d1hfet_]<br>UniProt : [http://www.uniprot.org/uniprot/P07598 P07598], [http://www.uniprot.org/uniprot/P07603 P07603]</span>
-|PROCESS={{GO|id=GO:0006810 | text = transport}}{{GO|id=GO:0006118 | text = electron transport}}
-|COMPONENT={{GO|id=GO:0042597 | text = periplasmic space}}
-|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL03 1Hfel03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL01 1Hfel01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL02 1Hfel02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM01 1Hfem01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM03 1Hfem03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM02 1Hfem02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeS00 1Hfes00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeT00 1Hfet00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009016 Ipr009016], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013352 Ipr013352], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004108 Ipr004108], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001450 Ipr001450], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003149 Ipr003149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006311 Ipr006311], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008953 Ipr008953]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02906 PF02906], [http://pfam.sanger.ac.uk/family?acc=PF00037 PF00037], [http://pfam.sanger.ac.uk/family?acc=PF02256 PF02256]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36018 d1hfel1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39001 d1hfel2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39002 d1hfem2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36019 d1hfem1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19640 d1hfes_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19641 d1hfet_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P07598 P07598], [http://ca.expasy.org/cgi-bin/niceprot.pl?P07603 P07603]</span>
 |uPDB=1HFE|CONSURF={{!}}-
 {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
@@ Line 18: / Line 14: @@
 <jmolButton>
 <script></script>
-<text>A [x]</text>
+<text>S [x]</text>
-<name>jmb_1hfe_A</name>
+<name>jmb_1hfe_S</name>
-<title>toggle chain A</title>
+<title>toggle chain S</title>
 <jsscript>ConsurfChainButton(elementClicked)</jsscript>
 <appendtargetsuffixtoid>true</appendtargetsuffixtoid>
@@ Line 28: / Line 24: @@
 <jmolButton>
 <script></script>
-<text>C [x]</text>
+<text>T [x]</text>
-<name>jmb_1hfe_C</name>
+<name>jmb_1hfe_T</name>
-<title>toggle chain C</title>
+<title>toggle chain T</title>
 <jsscript>ConsurfChainButton(elementClicked)</jsscript>
 <appendtargetsuffixtoid>true</appendtargetsuffixtoid>
@@ Line 39: / Line 35: @@
 <jmolButton>
 <script></script>
-<text>B [x]</text>
+<text>L [x]</text>
-<name>jmb_1hfe_B</name>
+<name>jmb_1hfe_L</name>
-<title>toggle chain B</title>
+<title>toggle chain L</title>
 <jsscript>ConsurfChainButton(elementClicked)</jsscript>
 <appendtargetsuffixtoid>true</appendtargetsuffixtoid>
@@ Line 49: / Line 45: @@
 <jmolButton>
 <script></script>
-<text>D [x]</text>
+<text>M [x]</text>
-<name>jmb_1hfe_D</name>
+<name>jmb_1hfe_M</name>
-<title>toggle chain D</title>
+<title>toggle chain M</title>
 <jsscript>ConsurfChainButton(elementClicked)</jsscript>
 <appendtargetsuffixtoid>true</appendtargetsuffixtoid>

Template:STRUCTURE 1hfe

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