1imr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1imr" size="450" color="white" frame="true" align="right" spinBox="true" caption="1imr, resolution 1.600&Aring;" /> '''MOLECULAR STRUCTURE...)
Current revision (07:36, 7 February 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1imr.gif|left|200px]]<br /><applet load="1imr" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1imr, resolution 1.600&Aring;" />
 
-
'''MOLECULAR STRUCTURE OF THE HALOGENATED ANTI-CANCER DRUG IODODOXORUBICIN COMPLEXED WITH D(TGTACA) AND D(CGATCG)'''<br />
 
-
==Overview==
+
==MOLECULAR STRUCTURE OF THE HALOGENATED ANTI-CANCER DRUG IODODOXORUBICIN COMPLEXED WITH D(TGTACA) AND D(CGATCG)==
-
4'-Deoxy-4'-iododoxorubicin, a halogenated anthracycline derivative, is an, anticancer agent currently under Phase II clinical trials. In preclinical, studies, it has demonstrated significantly reduced levels of, cardiotoxicity compared to currently employed anthracyclines. It also has, modified pharmacological properties resulting in an altered spectrum of, experimental antitumor activity. The iodine atom at the 4' position of the, sugar ring reduces the basicity and enhances the lipophilicity of this, compound as compared to related anthracycline drugs. We report here single, crystal X-ray diffraction studies of the complexes of, 4'-deoxy-4'-iododoxorubicin with the hexanucleotide duplex sequences, d(TGTACA) and d(CGATCG) at 1.6 and 1.5 A, respectively. The iodine, substituent does not alter the geometry of intercalation as compared to, previously solved anthracycline complexes, but appears to markedly affect, the solvent environment of the structures. This could have consequences, for the interaction of this drug with DNA and DNA binding proteins in, cells.
+
<StructureSection load='1imr' size='340' side='right'caption='[[1imr]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[1imr]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IMR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IMR FirstGlance]. <br>
-
1IMR is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/ ] with DM7 as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1IMR OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DM7:4-DEOXY-4-IODODOXORUBICIN'>DM7</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1imr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1imr OCA], [https://pdbe.org/1imr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1imr RCSB], [https://www.ebi.ac.uk/pdbsum/1imr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1imr ProSAT]</span></td></tr>
-
Molecular structure of the halogenated anti-cancer drug iododoxorubicin complexed with d(TGTACA) and d(CGATCG)., Berger I, Su L, Spitzner JR, Kang C, Burke TG, Rich A, Nucleic Acids Res. 1995 Nov 11;23(21):4488-94. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=7501474 7501474]
+
</table>
-
[[Category: Protein complex]]
+
__TOC__
-
[[Category: Berger, I.]]
+
</StructureSection>
-
[[Category: Burke, T.G.]]
+
[[Category: Large Structures]]
-
[[Category: Kang, C.]]
+
[[Category: Berger I]]
-
[[Category: Rich, A.]]
+
[[Category: Burke TG]]
-
[[Category: Spitzner, J.R.]]
+
[[Category: Kang C]]
-
[[Category: Su, L.]]
+
[[Category: Rich A]]
-
[[Category: DM7]]
+
[[Category: Spitzner JR]]
-
[[Category: complexed with drug]]
+
[[Category: Su L]]
-
[[Category: double helix]]
+
-
[[Category: right handed dna]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 22:13:50 2007''
+

Current revision

MOLECULAR STRUCTURE OF THE HALOGENATED ANTI-CANCER DRUG IODODOXORUBICIN COMPLEXED WITH D(TGTACA) AND D(CGATCG)

PDB ID 1imr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools