3ggl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:05, 6 September 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ggl.png|left|200px]]
 
-
<!--
+
==X-Ray Structure of the C-terminal domain (277-440) of Putative chitobiase from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium Target BtR324A.==
-
The line below this paragraph, containing "STRUCTURE_3ggl", creates the "Structure Box" on the page.
+
<StructureSection load='3ggl' size='340' side='right'caption='[[3ggl]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ggl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GGL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GGL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_3ggl| PDB=3ggl | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ggl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ggl OCA], [https://pdbe.org/3ggl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ggl RCSB], [https://www.ebi.ac.uk/pdbsum/3ggl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ggl ProSAT], [https://www.topsan.org/Proteins/NESGC/3ggl TOPSAN]</span></td></tr>
-
 
+
</table>
-
===X-Ray Structure of the C-terminal domain (277-440) of Putative chitobiase from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium Target BtR324A.===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8A9F0_BACTN Q8A9F0_BACTN]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3GGL is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GGL OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/3ggl_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ggl ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacteroides thetaiotaomicron]]
[[Category: Bacteroides thetaiotaomicron]]
-
[[Category: Acton, T.]]
+
[[Category: Large Structures]]
-
[[Category: Ciccosanti, C.]]
+
[[Category: Acton T]]
-
[[Category: Everett, J K.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Foote, E L.]]
+
[[Category: Everett JK]]
-
[[Category: Hunt, J.]]
+
[[Category: Foote EL]]
-
[[Category: Janjua, H.]]
+
[[Category: Hunt J]]
-
[[Category: Kuzin, A.]]
+
[[Category: Janjua H]]
-
[[Category: Lee, D.]]
+
[[Category: Kuzin A]]
-
[[Category: Montelione, G T.]]
+
[[Category: Lee D]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Montelione GT]]
-
[[Category: Nair, R.]]
+
[[Category: Nair R]]
-
[[Category: Neely, H.]]
+
[[Category: Neely H]]
-
[[Category: Rost, B.]]
+
[[Category: Rost B]]
-
[[Category: Seetharaman, R.]]
+
[[Category: Seetharaman R]]
-
[[Category: Tong, L.]]
+
[[Category: Tong L]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao R]]
-
[[Category: Bacteroides thetaiotaomicron]]
+
-
[[Category: Bt_0865]]
+
-
[[Category: Btr324a]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Q8a9f0_bactn]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structure genomic]]
+
-
[[Category: Unknown function]]
+
-
[[Category: X-ray]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 3 09:54:53 2009''
+

Current revision

X-Ray Structure of the C-terminal domain (277-440) of Putative chitobiase from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium Target BtR324A.

PDB ID 3ggl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools