3hly
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3hly is ON HOLD Authors: Vorobiev, S. , Su, M., Lee, D., Ciccosanti, C., Sahdev, S., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F. ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of the Flavodoxin-like domain from Synechococcus sp Q5MZP6_SYNP6 protein. Northeast Structural Genomics Consortium Target SnR135d.== | |
| - | + | <StructureSection load='3hly' size='340' side='right'caption='[[3hly]], [[Resolution|resolution]] 2.40Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3hly]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_elongatus_PCC_6301 Synechococcus elongatus PCC 6301]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HLY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HLY FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.403Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hly FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hly OCA], [https://pdbe.org/3hly PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hly RCSB], [https://www.ebi.ac.uk/pdbsum/3hly PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hly ProSAT], [https://www.topsan.org/Proteins/NESGC/3hly TOPSAN]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A0A0H3K5M0_SYNP6 A0A0H3K5M0_SYNP6] Mediates electron transfer from NADH to oxygen, reducing it to water. This modular protein has 3 redox cofactors, in other organisms the same activity requires 2 or 3 proteins.[ARBA:ARBA00025633] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hl/3hly_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hly ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Synechococcus elongatus PCC 6301]] | ||
| + | [[Category: Acton TB]] | ||
| + | [[Category: Ciccosanti C]] | ||
| + | [[Category: Hunt JF]] | ||
| + | [[Category: Lee D]] | ||
| + | [[Category: Montelione GT]] | ||
| + | [[Category: Sahdev S]] | ||
| + | [[Category: Su M]] | ||
| + | [[Category: Tong L]] | ||
| + | [[Category: Vorobiev S]] | ||
| + | [[Category: Xiao R]] | ||
Current revision
Crystal Structure of the Flavodoxin-like domain from Synechococcus sp Q5MZP6_SYNP6 protein. Northeast Structural Genomics Consortium Target SnR135d.
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Categories: Large Structures | Synechococcus elongatus PCC 6301 | Acton TB | Ciccosanti C | Hunt JF | Lee D | Montelione GT | Sahdev S | Su M | Tong L | Vorobiev S | Xiao R
