This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1vej
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1vej" size="450" color="white" frame="true" align="right" spinBox="true" caption="1vej" /> '''Solution Structure of RSGI RUH-016, a UBA Do...) |
|||
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1vej.gif|left|200px]]<br /><applet load="1vej" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1vej" /> | ||
| - | '''Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA'''<br /> | ||
| - | == | + | ==Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA== |
| - | + | <StructureSection load='1vej' size='340' side='right'caption='[[1vej]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1vej]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VEJ FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vej OCA], [https://pdbe.org/1vej PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vej RCSB], [https://www.ebi.ac.uk/pdbsum/1vej PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vej ProSAT], [https://www.topsan.org/Proteins/RSGI/1vej TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9D4I8_MOUSE Q9D4I8_MOUSE] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1vej_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vej ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
| - | + | [[Category: Abe T]] | |
| - | [[Category: Abe | + | [[Category: Hayashi F]] |
| - | [[Category: Hayashi | + | [[Category: Higuchi Y]] |
| - | [[Category: Higuchi | + | [[Category: Hirota H]] |
| - | [[Category: Hirota | + | [[Category: Yokoyama S]] |
| - | + | ||
| - | [[Category: Yokoyama | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA
| |||||||||||
Categories: Large Structures | Mus musculus | Abe T | Hayashi F | Higuchi Y | Hirota H | Yokoyama S

