3f8k

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{{Seed}}
 
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[[Image:3f8k.png|left|200px]]
 
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==Crystal structure of protein acetyltransferase (PAT) from Sulfolobus solfataricus==
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The line below this paragraph, containing "STRUCTURE_3f8k", creates the "Structure Box" on the page.
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<StructureSection load='3f8k' size='340' side='right'caption='[[3f8k]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3f8k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F8K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F8K FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3f8k| PDB=3f8k | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f8k OCA], [https://pdbe.org/3f8k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f8k RCSB], [https://www.ebi.ac.uk/pdbsum/3f8k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f8k ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PAT_SACS2 PAT_SACS2] Modulates activity of albA1, the major archaeal DNA compaction protein, by decreasing albA1's nucleic acid binding affinity through acetylation of 'Lys-16'.<ref>PMID:15824122</ref> <ref>PMID:19473964</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/3f8k_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f8k ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The Sulfolobus solfataricus protein acetyltransferase (PAT) acetylates ALBA, an abundant nonspecific DNA-binding protein, on Lys(16) to reduce its DNA affinity, and the Sir2 deacetylase reverses the modification to cause transcriptional repression. This represents a "primitive" model for chromatin regulation analogous to histone modification in eukaryotes. We report the 1.84-A crystal structure of PAT in complex with coenzyme A. The structure reveals homology to both prokaryotic GNAT acetyltransferases and eukaryotic histone acetyltransferases (HATs), with an additional "bent helix" proximal to the substrate binding site that might play an autoregulatory function. Investigation of active site mutants suggests that PAT does not use a single general base or acid residue for substrate deprotonation and product reprotonation, respectively, and that a diffusional step, such as substrate binding, may be rate-limiting. The catalytic efficiency of PAT toward ALBA is low relative to other acetyltransferases, suggesting that there may be better, unidentified substrates for PAT. The structural similarity of PAT to eukaryotic HATs combined with its conserved role in chromatin regulation suggests that PAT is evolutionarily related to the eukaryotic HATs.
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===Crystal structure of protein acetyltransferase (PAT) from Sulfolobus solfataricus===
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Structure and biochemical characterization of protein acetyltransferase from Sulfolobus solfataricus.,Brent MM, Iwata A, Carten J, Zhao K, Marmorstein R J Biol Chem. 2009 Jul 17;284(29):19412-9. Epub 2009 May 27. PMID:19473964<ref>PMID:19473964</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_19473964}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3f8k" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 19473964 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_19473964}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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3F8K is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus_p2 Sulfolobus solfataricus p2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F8K OCA].
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[[Category: Saccharolobus solfataricus P2]]
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[[Category: Brent MM]]
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==Reference==
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<ref group="xtra">PMID:19473964</ref><references group="xtra"/>
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[[Category: Sulfolobus solfataricus p2]]
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[[Category: Brent, M M.]]
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[[Category: Gcn5-related n-acetyltransferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 14:19:14 2009''
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Current revision

Crystal structure of protein acetyltransferase (PAT) from Sulfolobus solfataricus

PDB ID 3f8k

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