2w0m

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{{Seed}}
 
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[[Image:2w0m.png|left|200px]]
 
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==Crystal Structure of sso2452 from Sulfolobus solfataricus P2==
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The line below this paragraph, containing "STRUCTURE_2w0m", creates the "Structure Box" on the page.
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<StructureSection load='2w0m' size='340' side='right'caption='[[2w0m]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2w0m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W0M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W0M FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_2w0m| PDB=2w0m | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w0m OCA], [https://pdbe.org/2w0m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w0m RCSB], [https://www.ebi.ac.uk/pdbsum/2w0m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w0m ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q97VZ8_SACS2 Q97VZ8_SACS2]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w0/2w0m_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w0m ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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DNA recombinases (RecA in bacteria, Rad51 in eukarya and RadA in archaea) catalyse strand exchange between homologous DNA molecules, the central reaction of homologous recombination, and are among the most conserved DNA repair proteins known. RecA is the sole protein responsible for this reaction in bacteria, whereas there are several Rad51 paralogs that cooperate to catalyse strand exchange in eukaryotes. All archaea have at least one (and as many as four) RadA paralog, but their function remains unclear. Herein, we show that the three RadA paralogs encoded by the Sulfolobus solfataricus genome are expressed under normal growth conditions and are not UV inducible. We demonstrate that one of these proteins, Sso2452, which is representative of the large archaeal RadC subfamily of archaeal RadA paralogs, functions as an ATPase that binds tightly to single-stranded DNA. However, Sso2452 is not an active recombinase in vitro and inhibits D-loop formation by RadA. We present the high-resolution crystal structure of Sso2452, which reveals key structural differences from the canonical RecA family recombinases that may explain its functional properties. The possible roles of the archaeal RadA paralogs in vivo are discussed.
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===CRYSTAL STRUCTURE OF SSO2452 FROM SULFOLOBUS SOLFATARICUS P2===
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Structural and functional characterisation of a conserved archaeal RadA paralog with antirecombinase activity.,McRobbie AM, Carter LG, Kerou M, Liu H, McMahon SA, Johnson KA, Oke M, Naismith JH, White MF J Mol Biol. 2009 Jun 19;389(4):661-73. Epub 2009 May 3. PMID:19414020<ref>PMID:19414020</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_19414020}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2w0m" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 19414020 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_19414020}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2W0M is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus_p2 Sulfolobus solfataricus p2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W0M OCA].
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[[Category: Saccharolobus solfataricus P2]]
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[[Category: Carter L]]
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==Reference==
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[[Category: Johnson KA]]
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<ref group="xtra">PMID:19414020</ref><references group="xtra"/>
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[[Category: Kerou M]]
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[[Category: Sulfolobus solfataricus p2]]
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[[Category: Liu H]]
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[[Category: Carter, L.]]
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[[Category: McRobbie A]]
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[[Category: Johnson, K A.]]
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[[Category: Mcmahon S]]
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[[Category: Kerou, M.]]
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[[Category: Naismith JH]]
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[[Category: Liu, H.]]
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[[Category: Oke M]]
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[[Category: Mcmahon, S.]]
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[[Category: White MF]]
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[[Category: Mcrobbie, A.]]
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[[Category: Naismith, J H.]]
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[[Category: Oke, M.]]
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[[Category: White, M F.]]
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[[Category: Reca]]
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[[Category: Sso2452]]
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[[Category: Sspf]]
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[[Category: Sulfolobus solfataricus p2]]
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[[Category: Unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 17:37:06 2009''
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Current revision

Crystal Structure of sso2452 from Sulfolobus solfataricus P2

PDB ID 2w0m

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