This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3f8p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:37, 3 April 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3f8p.png|left|200px]]
 
-
<!--
+
==Structure of Sulfolobus solfataricus TrxR-B3==
-
The line below this paragraph, containing "STRUCTURE_3f8p", creates the "Structure Box" on the page.
+
<StructureSection load='3f8p' size='340' side='right'caption='[[3f8p]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3f8p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus Saccharolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F8P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F8P FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3f8p| PDB=3f8p | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f8p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f8p OCA], [https://pdbe.org/3f8p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f8p RCSB], [https://www.ebi.ac.uk/pdbsum/3f8p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f8p ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8X236_SACSO Q8X236_SACSO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/3f8p_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f8p ConSurf].
 +
<div style="clear:both"></div>
-
===Structure of Sulfolobus solfataricus TrxR-B3===
+
==See Also==
-
 
+
*[[Thioredoxin reductase 3D structures|Thioredoxin reductase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19110078}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 19110078 is the PubMed ID number.
+
[[Category: Saccharolobus solfataricus]]
-
-->
+
[[Category: Arcari P]]
-
{{ABSTRACT_PUBMED_19110078}}
+
[[Category: Masullo M]]
-
 
+
[[Category: Ruggiero A]]
-
==About this Structure==
+
[[Category: Ruocco MR]]
-
3F8P is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F8P OCA].
+
[[Category: Vitagliano L]]
-
 
+
[[Category: Zagari A]]
-
==Reference==
+
-
<ref group="xtra">PMID:19110078</ref><references group="xtra"/>
+
-
[[Category: Sulfolobus solfataricus]]
+
-
[[Category: Thioredoxin-disulfide reductase]]
+
-
[[Category: Arcari, P.]]
+
-
[[Category: Masullo, M.]]
+
-
[[Category: Ruggiero, A.]]
+
-
[[Category: Ruocco, M R.]]
+
-
[[Category: Vitagliano, L.]]
+
-
[[Category: Zagari, A.]]
+
-
[[Category: Fad]]
+
-
[[Category: Flavoprotein]]
+
-
[[Category: Nucleotide binding]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Redox protein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 18:39:45 2009''
+

Current revision

Structure of Sulfolobus solfataricus TrxR-B3

PDB ID 3f8p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3f8p"
Personal tools