This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ixv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:07, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ixv.png|left|200px]]
 
-
<!--
+
==Scorpion Hemocyanin resting state pseudo atomic model built based on cryo-EM density map==
-
The line below this paragraph, containing "STRUCTURE_3ixv", creates the "Structure Box" on the page.
+
<SX load='3ixv' size='340' side='right' viewer='molstar' caption='[[3ixv]], [[Resolution|resolution]] 6.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ixv]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Androctonus_australis Androctonus australis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IXV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IXV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 6.8&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ixv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ixv OCA], [https://pdbe.org/3ixv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ixv RCSB], [https://www.ebi.ac.uk/pdbsum/3ixv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ixv ProSAT]</span></td></tr>
-
{{STRUCTURE_3ixv| PDB=3ixv | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Scorpion Hemocyanin resting state pseudo atomic model built based on cryo-EM density map===
+
[https://www.uniprot.org/uniprot/HCY6_ANDAU HCY6_ANDAU]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19446530}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19446530 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/3ixv_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_19446530}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ixv ConSurf].
-
3IXV is a 12 chains structure of sequences from [http://en.wikipedia.org/wiki/Androctonus_australis Androctonus australis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IXV OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</SX>
-
<ref group="xtra">PMID:19446530</ref><references group="xtra"/>
+
[[Category: Androctonus australis]]
[[Category: Androctonus australis]]
-
[[Category: Chiu, W.]]
+
[[Category: Large Structures]]
-
[[Category: Cong, Y.]]
+
[[Category: Chiu W]]
-
[[Category: Decker, H.]]
+
[[Category: Cong Y]]
-
[[Category: Khant, H.]]
+
[[Category: Decker H]]
-
[[Category: Ludtke, S.]]
+
[[Category: Khant H]]
-
[[Category: Schweikardt, T.]]
+
[[Category: Ludtke S]]
-
[[Category: Woolford, D.]]
+
[[Category: Schweikardt T]]
-
[[Category: Zhang, Q.]]
+
[[Category: Woolford D]]
-
[[Category: Copper]]
+
[[Category: Zhang Q]]
-
[[Category: Cryo-em]]
+
-
[[Category: Enzyme]]
+
-
[[Category: Hc]]
+
-
[[Category: Hemocyanin]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Oxygen binding]]
+
-
[[Category: Oxygen transport]]
+
-
[[Category: Phenolxoidase activity]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Sd]]
+
-
[[Category: Secreted]]
+
-
[[Category: Single particle analysis]]
+
-
[[Category: Transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 19:45:44 2009''
+

Current revision

Scorpion Hemocyanin resting state pseudo atomic model built based on cryo-EM density map

3ixv, resolution 6.80Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools