This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3grc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 16 March 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3grc.png|left|200px]]
 
-
<!--
+
==Crystal structure of a sensor protein from Polaromonas sp. JS666==
-
The line below this paragraph, containing "STRUCTURE_3grc", creates the "Structure Box" on the page.
+
<StructureSection load='3grc' size='340' side='right'caption='[[3grc]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GRC FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3grc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grc OCA], [https://pdbe.org/3grc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3grc RCSB], [https://www.ebi.ac.uk/pdbsum/3grc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3grc ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3grc TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_3grc| PDB=3grc | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===Crystal structure of a sensor protein from Polaromonas sp. JS666===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3grc_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
3GRC is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Polaromonas_sp._js666 Polaromonas sp. js666]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRC OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Histidine kinase]]
+
</jmolCheckbox>
-
[[Category: Polaromonas sp. js666]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3grc ConSurf].
-
[[Category: Burley, S K.]]
+
<div style="clear:both"></div>
-
[[Category: Kumaran, D.]]
+
__TOC__
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
</StructureSection>
-
[[Category: Palani, K.]]
+
[[Category: Large Structures]]
-
[[Category: Swaminathan, S.]]
+
[[Category: Burley SK]]
-
[[Category: 11025b]]
+
[[Category: Kumaran D]]
-
[[Category: Kinase]]
+
[[Category: Palani K]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: Swaminathan S]]
-
[[Category: Nysgxrc]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Sensor protein]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 21:50:27 2009''
+

Current revision

Crystal structure of a sensor protein from Polaromonas sp. JS666

PDB ID 3grc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools