3frl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:33, 6 December 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3frl.jpg|left|200px]]
 
-
<!--
+
==The 2.25 A crystal structure of LipL32, the major surface antigen of Leptospira interrogans serovar Copenhageni==
-
The line below this paragraph, containing "STRUCTURE_3frl", creates the "Structure Box" on the page.
+
<StructureSection load='3frl' size='340' side='right'caption='[[3frl]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3frl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Leptospira_interrogans_serovar_Copenhageni Leptospira interrogans serovar Copenhageni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FRL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FRL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=211:2,2,2-NITRILOTRIETHANOL'>211</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene></td></tr>
-
{{STRUCTURE_3frl| PDB=3frl | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3frl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3frl OCA], [https://pdbe.org/3frl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3frl RCSB], [https://www.ebi.ac.uk/pdbsum/3frl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3frl ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q72SM7_LEPIC Q72SM7_LEPIC]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Leptospirosis, a spirochaetal zoonotic disease caused by Leptospira, has been recognized as an important emerging infectious disease. LipL32 is the major exposed outer membrane protein found exclusively in pathogenic leptospires, where it accounts for up to 75% of the total outer membrane proteins. It is highly immunogenic, and recent studies have implicated LipL32 as an extracellular matrix binding protein, interacting with collagens, fibronectin, and laminin. In order to better understand the biological role and the structural requirements for the function of this important lipoprotein, we have determined the 2.25-A-resolution structure of recombinant LipL32 protein corresponding to residues 21-272 of the wild-type protein (LipL32(21-272)). The LipL32(21-272) monomer is made of a jelly-roll fold core from which several peripheral secondary structures protrude. LipL32(21-272) is structurally similar to several other jelly-roll proteins, some of which bind calcium ions and extracellular matrix proteins. Indeed, spectroscopic data (circular dichroism, intrinsic tryptophan fluorescence, and extrinsic 1-amino-2-naphthol-4-sulfonic acid fluorescence) confirmed the calcium-binding properties of LipL32(21-272). Ca(2+) binding resulted in a significant increase in the thermal stability of the protein, and binding was specific for Ca(2+) as no structural or stability perturbations were observed for Mg(2+), Zn(2+), or Cu(2+). Careful examination of the crystallographic structure suggests the locations of putative regions that could mediate Ca(2+) binding as well as binding to other interacting host proteins, such as collagens, fibronectin, and laminin.
-
===The 2.25 A crystal structure of LipL32, the major surface antigen of Leptospira interrogans serovar Copenhageni===
+
Structure and calcium-binding activity of LipL32, the major surface antigen of pathogenic Leptospira sp.,Hauk P, Guzzo CR, Roman Ramos H, Ho PL, Farah CS J Mol Biol. 2009 Jul 24;390(4):722-36. Epub 2009 May 25. PMID:19477185<ref>PMID:19477185</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19477185}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 3frl" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19477185 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_19477185}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
3FRL is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Leptospira_interrogans_serovar_copenhageni Leptospira interrogans serovar copenhageni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FRL OCA].
+
[[Category: Leptospira interrogans serovar Copenhageni]]
-
 
+
[[Category: Farah CS]]
-
==Reference==
+
[[Category: Guzzo CR]]
-
<ref group="xtra">PMID:19477185</ref><references group="xtra"/>
+
[[Category: Hauk P]]
-
[[Category: Leptospira interrogans serovar copenhageni]]
+
[[Category: Ho PL]]
-
[[Category: Farah, C S.]]
+
-
[[Category: Guzzo, C R.]]
+
-
[[Category: Hauk, P.]]
+
-
[[Category: Ho, P L.]]
+
-
[[Category: Core jelly-roll fold]]
+
-
[[Category: Membrane protein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 17 10:26:49 2009''
+

Current revision

The 2.25 A crystal structure of LipL32, the major surface antigen of Leptospira interrogans serovar Copenhageni

PDB ID 3frl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools