1vqy
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1vqy" size="450" color="white" frame="true" align="right" spinBox="true" caption="1vqy, resolution 2.40Å" /> '''Crystal structure of...) |
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| - | [[Image:1vqy.gif|left|200px]]<br /><applet load="1vqy" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1vqy, resolution 2.40Å" /> | ||
| - | '''Crystal structure of a NIPSNAP family protein with unknown function (np_396154.1) from Agrobacterium tumefaciens at 2.40 A resolution'''<br /> | ||
| - | == | + | ==CRYSTAL STRUCTURE OF a NIPSNAP FAMILY PROTEIN (ATU5224) FROM AGROBACTERIUM TUMEFACIENS STR. C58 AT 2.40 A RESOLUTION== |
| - | + | <StructureSection load='1vqy' size='340' side='right'caption='[[1vqy]], [[Resolution|resolution]] 2.40Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[1vqy]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VQY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VQY FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vqy OCA], [https://pdbe.org/1vqy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vqy RCSB], [https://www.ebi.ac.uk/pdbsum/1vqy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vqy ProSAT], [https://www.topsan.org/Proteins/JCSG/1vqy TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | [ | + | == Function == |
| - | [[ | + | [https://www.uniprot.org/uniprot/A9CLJ4_AGRFC A9CLJ4_AGRFC] |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vq/1vqy_consurf.spt"</scriptWhenChecked> | |
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vqy ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Agrobacterium fabrum str. C58]] | ||
| + | [[Category: Large Structures]] | ||
Current revision
CRYSTAL STRUCTURE OF a NIPSNAP FAMILY PROTEIN (ATU5224) FROM AGROBACTERIUM TUMEFACIENS STR. C58 AT 2.40 A RESOLUTION
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