2qmi

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{{Seed}}
 
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[[Image:2qmi.png|left|200px]]
 
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==Structure of the octameric penicillin-binding protein homologue from Pyrococcus abyssi==
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The line below this paragraph, containing "STRUCTURE_2qmi", creates the "Structure Box" on the page.
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<StructureSection load='2qmi' size='340' side='right'caption='[[2qmi]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2qmi]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QMI FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DO3:10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE+1,4,7-TRIACETIC+ACID'>DO3</scene>, <scene name='pdbligand=LU:LUTETIUM+(III)+ION'>LU</scene></td></tr>
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{{STRUCTURE_2qmi| PDB=2qmi | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qmi OCA], [https://pdbe.org/2qmi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qmi RCSB], [https://www.ebi.ac.uk/pdbsum/2qmi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qmi ProSAT]</span></td></tr>
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</table>
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===Structure of the octameric penicillin-binding protein homologue from Pyrococcus abyssi===
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== Function ==
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[https://www.uniprot.org/uniprot/Q9V2D6_PYRAB Q9V2D6_PYRAB]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_19266066}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 19266066 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/2qmi_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_19266066}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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2QMI is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QMI OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qmi ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:19266066</ref><references group="xtra"/>
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</StructureSection>
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[[Category: Beta-lactamase]]
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[[Category: Large Structures]]
[[Category: Pyrococcus abyssi]]
[[Category: Pyrococcus abyssi]]
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[[Category: Delfosse, V.]]
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[[Category: Delfosse V]]
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[[Category: Girard, E.]]
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[[Category: Girard E]]
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[[Category: Mayer, C.]]
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[[Category: Mayer C]]
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[[Category: Moulinier, L.]]
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[[Category: Moulinier L]]
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[[Category: Schultz, P.]]
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[[Category: Schultz P]]
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[[Category: Archaea]]
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[[Category: Hydrolase]]
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[[Category: Lu-hpdo3a]]
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[[Category: Octamer]]
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[[Category: Pab87]]
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[[Category: Pbp]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 25 08:27:46 2009''
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Current revision

Structure of the octameric penicillin-binding protein homologue from Pyrococcus abyssi

PDB ID 2qmi

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