This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fr7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:51, 13 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2fr7.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Cytochrome P450 CYP199A2==
-
The line below this paragraph, containing "STRUCTURE_2fr7", creates the "Structure Box" on the page.
+
<StructureSection load='2fr7' size='340' side='right'caption='[[2fr7]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2fr7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_CGA009 Rhodopseudomonas palustris CGA009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FR7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
{{STRUCTURE_2fr7| PDB=2fr7 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fr7 OCA], [https://pdbe.org/2fr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fr7 RCSB], [https://www.ebi.ac.uk/pdbsum/2fr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fr7 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of Cytochrome P450 CYP199A2===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/CYPA2_RHOPA CYPA2_RHOPA] The oxidative demethylation of 4-methoxybenzoate requires the participation of the monooxygenase CYP199A2, the ferredoxin-like protein ThcC/RPA1872 and a ferredoxin reductase to mediate the transfer of electrons from NADH to CYP199A2. It is also active with 4-ethylbenzoate.<ref>PMID:16472768</ref> <ref>PMID:18762195</ref>
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_18762195}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 18762195 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fr/2fr7_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_18762195}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2FR7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_cga009 Rhodopseudomonas palustris cga009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FR7 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fr7 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
== References ==
-
<ref group="xtra">PMID:18762195</ref><references group="xtra"/>
+
<references/>
-
[[Category: Rhodopseudomonas palustris cga009]]
+
__TOC__
-
[[Category: Bell, S G.]]
+
</StructureSection>
-
[[Category: Rao, Z.]]
+
[[Category: Large Structures]]
-
[[Category: Wong, L L.]]
+
[[Category: Rhodopseudomonas palustris CGA009]]
-
[[Category: Xu, F.]]
+
[[Category: Bell SG]]
-
[[Category: Oxidoreductase]]
+
[[Category: Rao Z]]
-
[[Category: P450 family protein fold]]
+
[[Category: Wong LL]]
-
 
+
[[Category: Xu F]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 25 09:11:02 2009''
+

Current revision

Crystal Structure of Cytochrome P450 CYP199A2

PDB ID 2fr7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools