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3hvz
From Proteopedia
(Difference between revisions)
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| - | [[Image:3hvz.jpg|left|200px]] | ||
| - | + | ==Crystal Structure of the TGS domain of the CLOLEP_03100 protein from Clostridium leptum, Northeast Structural Genomics Consortium Target QlR13A== | |
| - | + | <StructureSection load='3hvz' size='340' side='right'caption='[[3hvz]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3hvz]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_leptum_atcc_29065 Clostridium leptum atcc 29065]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HVZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HVZ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CLOLEP_03100 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=428125 Clostridium leptum ATCC 29065])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hvz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hvz OCA], [https://pdbe.org/3hvz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hvz RCSB], [https://www.ebi.ac.uk/pdbsum/3hvz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hvz ProSAT], [https://www.topsan.org/Proteins/NESGC/3hvz TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [[https://www.uniprot.org/uniprot/A7VWX7_9FIRM A7VWX7_9FIRM]] In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.[RuleBase:RU003847] | |
| - | + | == Evolutionary Conservation == | |
| - | == | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| - | [[Category: Clostridium leptum | + | <jmolCheckbox> |
| - | [[Category: Acton, T B | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hv/3hvz_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Ciccosanti, C | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Everett, J K | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Forouhar, F | + | </jmolCheckbox> |
| - | [[Category: Hunt, J F | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hvz ConSurf]. |
| - | [[Category: Lee, D | + | <div style="clear:both"></div> |
| - | [[Category: Lew, S | + | __TOC__ |
| - | [[Category: Montelione, G T | + | </StructureSection> |
| - | [[Category: | + | [[Category: Clostridium leptum atcc 29065]] |
| - | [[Category: Nair, R | + | [[Category: Large Structures]] |
| - | [[Category: Rost, B | + | [[Category: Acton, T B]] |
| - | [[Category: Sahdev, S | + | [[Category: Ciccosanti, C]] |
| - | [[Category: Seetharaman, J | + | [[Category: Everett, J K]] |
| - | [[Category: Tong, L | + | [[Category: Forouhar, F]] |
| - | [[Category: Xiao, R | + | [[Category: Hunt, J F]] |
| + | [[Category: Lee, D]] | ||
| + | [[Category: Lew, S]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nair, R]] | ||
| + | [[Category: Rost, B]] | ||
| + | [[Category: Sahdev, S]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Xiao, R]] | ||
[[Category: Alpha-beta protein]] | [[Category: Alpha-beta protein]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 25 11:29:33 2009'' | ||
Current revision
Crystal Structure of the TGS domain of the CLOLEP_03100 protein from Clostridium leptum, Northeast Structural Genomics Consortium Target QlR13A
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Categories: Clostridium leptum atcc 29065 | Large Structures | Acton, T B | Ciccosanti, C | Everett, J K | Forouhar, F | Hunt, J F | Lee, D | Lew, S | Montelione, G T | Structural genomic | Nair, R | Rost, B | Sahdev, S | Seetharaman, J | Tong, L | Xiao, R | Alpha-beta protein | Nesg | PSI, Protein structure initiative | Unknown function
