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3h0d

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{{Seed}}
 
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[[Image:3h0d.jpg|left|200px]]
 
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==Crystal structure of CtsR in complex with a 26bp DNA duplex==
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The line below this paragraph, containing "STRUCTURE_3h0d", creates the "Structure Box" on the page.
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<StructureSection load='3h0d' size='340' side='right'caption='[[3h0d]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3h0d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H0D FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3h0d| PDB=3h0d | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CtsR ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 ATCC 12980])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h0d OCA], [https://pdbe.org/3h0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h0d RCSB], [https://www.ebi.ac.uk/pdbsum/3h0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h0d ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h0/3h0d_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h0d ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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All living organisms face a variety of environmental stresses that cause the misfolding and aggregation of proteins. To eliminate damaged proteins, cells developed highly efficient stress response and protein quality control systems. We performed a biochemical and structural analysis of the bacterial CtsR/McsB stress response. The crystal structure of the CtsR repressor, in complex with DNA, pinpointed key residues important for high-affinity binding to the promoter regions of heat-shock genes. Moreover, biochemical characterization of McsB revealed that McsB specifically phosphorylates arginine residues in the DNA binding domain of CtsR, thereby impairing its function as a repressor of stress response genes. Identification of the CtsR/McsB arginine phospho-switch expands the repertoire of possible protein modifications involved in prokaryotic and eukaryotic transcriptional regulation.
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===Crystal structure of CtsR in complex with a 26bp DNA duplex===
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McsB is a protein arginine kinase that phosphorylates and inhibits the heat-shock regulator CtsR.,Fuhrmann J, Schmidt A, Spiess S, Lehner A, Turgay K, Mechtler K, Charpentier E, Clausen T Science. 2009 Jun 5;324(5932):1323-7. PMID:19498169<ref>PMID:19498169</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<!--
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_19498169}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3h0d" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 19498169 is the PubMed ID number.
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== References ==
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-->
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<references/>
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{{ABSTRACT_PUBMED_19498169}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Atcc 12980]]
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3H0D is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H0D OCA].
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[[Category: Large Structures]]
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[[Category: Clausen, T]]
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==Reference==
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[[Category: Fuhrmann, J]]
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<ref group="xtra">PMID:19498169</ref><references group="xtra"/>
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[[Category: Geobacillus stearothermophilus]]
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[[Category: Clausen, T.]]
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[[Category: Fuhrmann, J.]]
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[[Category: 4-helix bundle]]
[[Category: 4-helix bundle]]
[[Category: Dna tandem repeat]]
[[Category: Dna tandem repeat]]
[[Category: Protein dna complex]]
[[Category: Protein dna complex]]
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[[Category: Transcription/dna complex]]
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[[Category: Transcription-dna complex]]
[[Category: Winged hth domain]]
[[Category: Winged hth domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 1 09:09:53 2009''
 

Current revision

Crystal structure of CtsR in complex with a 26bp DNA duplex

PDB ID 3h0d

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