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3dkr

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{{Seed}}
 
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[[Image:3dkr.jpg|left|200px]]
 
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==Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism==
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The line below this paragraph, containing "STRUCTURE_3dkr", creates the "Structure Box" on the page.
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<StructureSection load='3dkr' size='340' side='right'caption='[[3dkr]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3dkr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lacticaseibacillus_rhamnosus_HN001 Lacticaseibacillus rhamnosus HN001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DKR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DKR FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
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{{STRUCTURE_3dkr| PDB=3dkr | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dkr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dkr OCA], [https://pdbe.org/3dkr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dkr RCSB], [https://www.ebi.ac.uk/pdbsum/3dkr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dkr ProSAT]</span></td></tr>
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</table>
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===Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism===
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== Function ==
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[https://www.uniprot.org/uniprot/B2CZF3_LACRH B2CZF3_LACRH]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3DKR is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_rhamnosus Lactobacillus rhamnosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DKR OCA].
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Check<jmol>
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[[Category: Lactobacillus rhamnosus]]
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<jmolCheckbox>
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[[Category: Bennett, M D.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dk/3dkr_consurf.spt"</scriptWhenChecked>
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[[Category: Delabre, M L.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Holland, R.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Norris, G E.]]
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</jmolCheckbox>
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[[Category: Alpha beta hydrolase]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dkr ConSurf].
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[[Category: Catalytic triad]]
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<div style="clear:both"></div>
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[[Category: Esterase]]
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__TOC__
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[[Category: Mechanism]]
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</StructureSection>
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[[Category: Rotation]]
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[[Category: Lacticaseibacillus rhamnosus HN001]]
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[[Category: Large Structures]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 1 09:36:06 2009''
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[[Category: Bennett MD]]
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[[Category: Delabre M-L]]
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[[Category: Holland R]]
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[[Category: Norris GE]]

Current revision

Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism

PDB ID 3dkr

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