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3hqv

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{{Seed}}
 
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[[Image:3hqv.jpg|left|200px]]
 
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<!--
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==Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, rigid body refinement==
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The line below this paragraph, containing "STRUCTURE_3hqv", creates the "Structure Box" on the page.
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<StructureSection load='3hqv' size='340' side='right'caption='[[3hqv]], [[Resolution|resolution]] 5.16&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3hqv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ygv 1ygv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HQV FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Fiber diffraction, [[Resolution|Resolution]] 5.16&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>, <scene name='pdbligand=LYZ:5-HYDROXYLYSINE'>LYZ</scene></td></tr>
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{{STRUCTURE_3hqv| PDB=3hqv | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hqv OCA], [https://pdbe.org/3hqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hqv RCSB], [https://www.ebi.ac.uk/pdbsum/3hqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hqv ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CO1A2_RAT CO1A2_RAT] Type I collagen is a member of group I collagen (fibrillar forming collagen).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hq/3hqv_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hqv ConSurf].
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<div style="clear:both"></div>
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===Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, rigid body refinement===
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==See Also==
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*[[Collagen 3D structures|Collagen 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_16751282}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 16751282 is the PubMed ID number.
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{{ABSTRACT_PUBMED_16751282}}
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==About this Structure==
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3HQV is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ygv 1ygv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HQV OCA].
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==Reference==
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<ref group="xtra">PMID:16751282</ref><references group="xtra"/>
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[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
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[[Category: Orgel, J P.]]
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[[Category: Orgel JP]]
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[[Category: Collagen]]
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[[Category: Contractile protein]]
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[[Category: Extracellular matrix]]
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[[Category: Glycoprotein]]
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[[Category: Hydroxylation]]
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[[Category: In situ]]
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[[Category: Molecular envelope]]
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[[Category: Native]]
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[[Category: Packing structure]]
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[[Category: Pyrrolidone carboxylic acid]]
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[[Category: Secreted]]
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[[Category: Structural protein]]
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[[Category: Structural protein/contractile protein complex]]
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[[Category: Supermolecular]]
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[[Category: Supramolecular]]
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[[Category: Triple-helical]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 15 08:38:27 2009''
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Current revision

Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, rigid body refinement

PDB ID 3hqv

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