This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cg1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:35, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3cg1.png|left|200px]]
 
-
<!--
+
==Crystal structure of P. furiosus periplasmic binding protein ModA/WtpA with bound tungstate==
-
The line below this paragraph, containing "STRUCTURE_3cg1", creates the "Structure Box" on the page.
+
<StructureSection load='3cg1' size='340' side='right'caption='[[3cg1]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3cg1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CG1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CG1 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=WO4:TUNGSTATE(VI)ION'>WO4</scene></td></tr>
-
{{STRUCTURE_3cg1| PDB=3cg1 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cg1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cg1 OCA], [https://pdbe.org/3cg1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cg1 RCSB], [https://www.ebi.ac.uk/pdbsum/3cg1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cg1 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/WTPA_PYRFU WTPA_PYRFU] Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Binds tungstate and molybdate, with a preference for tungstate.<ref>PMID:16952940</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cg/3cg1_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cg1 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of P. furiosus periplasmic binding protein ModA/WtpA with bound tungstate===
+
==See Also==
-
 
+
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19234723}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 19234723 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_19234723}}
+
-
 
+
-
==About this Structure==
+
-
3CG1 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CG1 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:19234723</ref><references group="xtra"/>
+
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Comellas-Bigler, M.]]
+
[[Category: Comellas-Bigler M]]
-
[[Category: Hollenstein, K.]]
+
[[Category: Hollenstein K]]
-
[[Category: Locher, K P.]]
+
[[Category: Locher KP]]
-
[[Category: Abc transporter]]
+
-
[[Category: Binding protein]]
+
-
[[Category: Crystal structure]]
+
-
[[Category: Ligand]]
+
-
[[Category: Molybdate]]
+
-
[[Category: Transport protein]]
+
-
[[Category: Tungstate]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 22 20:08:27 2009''
+

Current revision

Crystal structure of P. furiosus periplasmic binding protein ModA/WtpA with bound tungstate

PDB ID 3cg1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools