This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2goy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:28, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2goy.png|left|200px]]
 
-
<!--
+
==Crystal structure of assimilatory adenosine 5'-phosphosulfate reductase with bound APS==
-
The line below this paragraph, containing "STRUCTURE_2goy", creates the "Structure Box" on the page.
+
<StructureSection load='2goy' size='340' side='right'caption='[[2goy]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2goy]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GOY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GOY FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADX:ADENOSINE-5-PHOSPHOSULFATE'>ADX</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
-
{{STRUCTURE_2goy| PDB=2goy | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2goy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2goy OCA], [https://pdbe.org/2goy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2goy RCSB], [https://www.ebi.ac.uk/pdbsum/2goy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2goy ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of assimilatory adenosine 5'-phosphosulfate reductase with bound APS===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/CYSH_PSEAE CYSH_PSEAE] Reduction of activated sulfate into sulfite (By similarity).
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_17010373}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 17010373 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/go/2goy_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_17010373}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2GOY is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GOY OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2goy ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:17010373</ref><references group="xtra"/>
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Bertozzi, C R.]]
+
[[Category: Bertozzi CR]]
-
[[Category: Carroll, K S.]]
+
[[Category: Carroll KS]]
-
[[Category: Chartron, J.]]
+
[[Category: Chartron J]]
-
[[Category: Gao, H.]]
+
[[Category: Gao H]]
-
[[Category: Leary, J A.]]
+
[[Category: Leary JA]]
-
[[Category: Shiau, C.]]
+
[[Category: Shiau C]]
-
[[Category: Stout, C D.]]
+
[[Category: Stout CD]]
-
[[Category: Adenosine 5'-phosphosulfate]]
+
-
[[Category: Iron sulfur cluster]]
+
-
[[Category: Nucleotide binding]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Thiosulfonate intermediate]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 22 20:16:06 2009''
+

Current revision

Crystal structure of assimilatory adenosine 5'-phosphosulfate reductase with bound APS

PDB ID 2goy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2goy"
Personal tools