1sb6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1sb6" size="450" color="white" frame="true" align="right" spinBox="true" caption="1sb6" /> '''Solution structure of a cyanobacterial coppe...)
Current revision (06:34, 1 May 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1sb6.jpg|left|200px]]<br /><applet load="1sb6" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1sb6" />
 
-
'''Solution structure of a cyanobacterial copper metallochaperone, ScAtx1'''<br />
 
-
==Overview==
+
==Solution structure of a cyanobacterial copper metallochaperone, ScAtx1==
-
The Atx1 copper metallochaperone from Synechocystis PCC 6803, ScAtx1, interacts with two P(1)-type copper ATPases to supply copper proteins, within intracellular compartments, avoiding ATPases for other metals en, route. Here we report NMR-derived solution structures for ScAtx1. The, monomeric apo form has a betaalphabetabetaalpha fold with backbone motions, largely restricted to loop 1 containing Cys-12 and Cys-15. The tumbling, rate of Cu(I)ScAtx1 (0.1-0.8 mm) implies dimers. Experimental restraints, are satisfied by symmetrical dimers with Cys-12 or His-61, but not Cys-15, invading the copper site of the opposing subunit. A full sequence of, copper ligands from the cell surface to thylakoid compartments is, proposed, considering in vitro homodimer liganding to mimic in vivo, liganding in ScAtx1-ATPase heterodimers. A monomeric high resolution, structure for Cu(I)ScAtx1, with Cys-12, Cys-15, and His-61 as ligands, is, calculated without violations despite the rotational correlation time., (2)J(NH) couplings in the imidazole ring of His-61 establish coordination, of N(epsilon2) to copper. His-61 is analogous to Lys-65 in eukaryotic, metallochaperones, stabilizing Cu(I)S(2) complexes but by binding Cu(I), rather than compensating charge. Cys-Cys-His ligand sets are an emergent, theme in some copper metallochaperones, although not in related Atx1, CopZ, or Hah1. Surface charge (Glu-13) close to the metal-binding site of, ScAtx1 is likely to support interaction with complementary surfaces of, copper-transporting ATPases (PacS-Arg-11 and CtaA-Lys-14) but to, discourage interaction with zinc ATPase ZiaA and so inhibit aberrant, formation of copper-ZiaA complexes.
+
<StructureSection load='1sb6' size='340' side='right'caption='[[1sb6]]' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[1sb6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SB6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SB6 FirstGlance]. <br>
-
1SB6 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1SB6 OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sb6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sb6 OCA], [https://pdbe.org/1sb6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sb6 RCSB], [https://www.ebi.ac.uk/pdbsum/1sb6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sb6 ProSAT]</span></td></tr>
-
==Reference==
+
</table>
-
Solution structures of a cyanobacterial metallochaperone: insight into an atypical copper-binding motif., Banci L, Bertini I, Ciofi-Baffoni S, Su XC, Borrelly GP, Robinson NJ, J Biol Chem. 2004 Jun 25;279(26):27502-10. Epub 2004 Apr 8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15075318 15075318]
+
== Function ==
-
[[Category: Single protein]]
+
[https://www.uniprot.org/uniprot/P73213_SYNY3 P73213_SYNY3]
-
[[Category: Synechocystis sp.]]
+
== Evolutionary Conservation ==
-
[[Category: Banci, L.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Bertini, I.]]
+
Check<jmol>
-
[[Category: Borrelly, G.P.]]
+
<jmolCheckbox>
-
[[Category: Ciofi-Baffoni, S.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sb/1sb6_consurf.spt"</scriptWhenChecked>
-
[[Category: Robinson, N.J.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: SPINE, Structural.Proteomics.in.Europe.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Su, X.C.]]
+
</jmolCheckbox>
-
[[Category: copper chaperone]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sb6 ConSurf].
-
[[Category: new metal binding motif]]
+
<div style="clear:both"></div>
-
[[Category: nmr]]
+
__TOC__
-
[[Category: spine]]
+
</StructureSection>
-
[[Category: structural genomics]]
+
[[Category: Large Structures]]
-
[[Category: structural proteomics in europe]]
+
[[Category: Synechocystis sp. PCC 6803]]
-
[[Category: structure]]
+
[[Category: Banci L]]
-
 
+
[[Category: Bertini I]]
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 00:12:30 2007''
+
[[Category: Borrelly GP]]
 +
[[Category: Ciofi-Baffoni S]]
 +
[[Category: Robinson NJ]]
 +
[[Category: Su XC]]

Current revision

Solution structure of a cyanobacterial copper metallochaperone, ScAtx1

PDB ID 1sb6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools