3gm6

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{{Seed}}
 
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[[Image:3gm6.jpg|left|200px]]
 
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==Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate==
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The line below this paragraph, containing "STRUCTURE_3gm6", creates the "Structure Box" on the page.
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<StructureSection load='3gm6' size='340' side='right'caption='[[3gm6]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3gm6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GM6 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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{{STRUCTURE_3gm6| PDB=3gm6 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gm6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm6 OCA], [https://pdbe.org/3gm6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gm6 RCSB], [https://www.ebi.ac.uk/pdbsum/3gm6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gm6 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/NIR_THIND NIR_THIND] Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process (PubMed:16500161, PubMed:22281743). Has very low activity toward hydroxylamine (PubMed:16500161). Has even lower activity toward sulfite (PubMed:16500161, PubMed:22281743). Sulfite reductase activity is maximal at neutral pH (PubMed:20944237).<ref>PMID:16500161</ref> <ref>PMID:20944237</ref> <ref>PMID:22281743</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gm6_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gm6 ConSurf].
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<div style="clear:both"></div>
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===Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate===
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==See Also==
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*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
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== References ==
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==About this Structure==
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<references/>
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3GM6 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM6 OCA].
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Thioalkalivibrio nitratireducens]]
[[Category: Thioalkalivibrio nitratireducens]]
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[[Category: Boyko, K M.]]
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[[Category: Boyko KM]]
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[[Category: Dorovatovsky, P V.]]
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[[Category: Dorovatovsky PV]]
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[[Category: Filimonenkov, A A.]]
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[[Category: Filimonenkov AA]]
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[[Category: Polyakov, K M.]]
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[[Category: Polyakov KM]]
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[[Category: Popov, V O.]]
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[[Category: Popov VO]]
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[[Category: Tikhonova, T V.]]
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[[Category: Tikhonova TV]]
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[[Category: Trofimov, A A.]]
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[[Category: Trofimov AA]]
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[[Category: Alpha protein]]
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[[Category: Eight hemes c]]
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[[Category: Oxidoreductase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 5 10:58:40 2009''
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Current revision

Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate

PDB ID 3gm6

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