3idz

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[[Image:3idz.jpg|left|200px]]
 
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==Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8==
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The line below this paragraph, containing "STRUCTURE_3idz", creates the "Structure Box" on the page.
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<StructureSection load='3idz' size='340' side='right'caption='[[3idz]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3idz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2zdf 2zdf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IDZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IDZ FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_3idz| PDB=3idz | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3idz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3idz OCA], [https://pdbe.org/3idz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3idz RCSB], [https://www.ebi.ac.uk/pdbsum/3idz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3idz ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RNSE_THET8 RNSE_THET8] Has endoribonuclease activity towards 23S and 16S rRNA (in vitro).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/3idz_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3idz ConSurf].
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<div style="clear:both"></div>
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===Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8===
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==See Also==
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*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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3IDZ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2zdf 2zdf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IDZ OCA].
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[[Category: Large Structures]]
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[[Category: Thermus thermophilus hb8]]
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[[Category: Thermus thermophilus HB8]]
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[[Category: Ishikawa, H.]]
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[[Category: Ishikawa H]]
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[[Category: Kuramitsu, S.]]
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[[Category: Kuramitsu S]]
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[[Category: Masui, R.]]
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[[Category: Masui R]]
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[[Category: Nakagawa, N.]]
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[[Category: Nakagawa N]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S.]]
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[[Category: Cytoplasm]]
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[[Category: Endonuclease]]
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[[Category: Hydrolase]]
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[[Category: Metal-binding]]
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[[Category: Metallo beta lactamase fold]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Nuclease]]
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[[Category: Riken structural genomics/proteomics initiative]]
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[[Category: Rna-binding]]
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[[Category: Rrna processing]]
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[[Category: Rsgi]]
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[[Category: Structural genomic]]
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[[Category: Zinc]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 5 11:06:32 2009''
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Current revision

Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8

PDB ID 3idz

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Proteopedia Page Contributors and Editors (what is this?)

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