2kmm
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 2kmm is ON HOLD until Sep 25 2010 Authors: Yang, Y., Ramelot, T.A., Cort, J.R., Lee, D., Ciccosanti, C., Hamilton, K., Nair, R., Rost, B., Acton, T....) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)== | |
| - | + | <StructureSection load='2kmm' size='340' side='right'caption='[[2kmm]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2kmm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KMM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KMM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kmm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kmm OCA], [https://pdbe.org/2kmm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kmm RCSB], [https://www.ebi.ac.uk/pdbsum/2kmm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kmm ProSAT]</span></td></tr> | |
| - | + | </table> | |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q7MAV5_PORGI Q7MAV5_PORGI] In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (By similarity).[RuleBase:RU003847] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/2kmm_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kmm ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Porphyromonas gingivalis]] | ||
| + | [[Category: Acton TB]] | ||
| + | [[Category: Ciccosanti C]] | ||
| + | [[Category: Cort JR]] | ||
| + | [[Category: Everett JK]] | ||
| + | [[Category: Hamilton K]] | ||
| + | [[Category: Kennedy MA]] | ||
| + | [[Category: Lee D]] | ||
| + | [[Category: Montelione GT]] | ||
| + | [[Category: Nair R]] | ||
| + | [[Category: Ramelot TA]] | ||
| + | [[Category: Rost B]] | ||
| + | [[Category: Swapna G]] | ||
| + | [[Category: Xiao R]] | ||
| + | [[Category: Yang Y]] | ||
Current revision
Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)
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Categories: Large Structures | Porphyromonas gingivalis | Acton TB | Ciccosanti C | Cort JR | Everett JK | Hamilton K | Kennedy MA | Lee D | Montelione GT | Nair R | Ramelot TA | Rost B | Swapna G | Xiao R | Yang Y
