3ips
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3ips is ON HOLD Authors: Fradera, X., Vu, D., Nimz, O., Skene, R., Hosfield, D., Wijnands, R., Cooke, A.J., Haunso, A., King, A., Bennet, D.J., McGu...) |
|||
(9 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==X-ray structure of benzisoxazole synthetic agonist bound to the LXR-alpha== | |
+ | <StructureSection load='3ips' size='340' side='right'caption='[[3ips]], [[Resolution|resolution]] 2.26Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3ips]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IPS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IPS FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.26Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=O90:{3-CHLORO-4-[(3-{[7-PROPYL-3-(TRIFLUOROMETHYL)-1,2-BENZISOXAZOL-6-YL]OXY}PROPYL)SULFANYL]PHENYL}ACETIC+ACID'>O90</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ips FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ips OCA], [https://pdbe.org/3ips PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ips RCSB], [https://www.ebi.ac.uk/pdbsum/3ips PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ips ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/NR1H3_HUMAN NR1H3_HUMAN] Orphan receptor. Interaction with RXR shifts RXR from its role as a silent DNA-binding partner to an active ligand-binding subunit in mediating retinoid responses through target genes defined by LXRES. LXRES are DR4-type response elements characterized by direct repeats of two similar hexanuclotide half-sites spaced by four nucleotides. Plays an important role in the regulation of cholesterol homeostasis, regulating cholesterol uptake through MYLIP-dependent ubiquitination of LDLR, VLDLR and LRP8 (By similarity). | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ip/3ips_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ips ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
- | + | ==See Also== | |
- | + | *[[Liver X receptor|Liver X receptor]] | |
- | + | __TOC__ | |
- | + | </StructureSection> | |
- | + | [[Category: Homo sapiens]] | |
+ | [[Category: Large Structures]] | ||
+ | [[Category: Bennet DJ]] | ||
+ | [[Category: Cooke AJ]] | ||
+ | [[Category: Fradera X]] | ||
+ | [[Category: Haunso A]] | ||
+ | [[Category: Hosfield D]] | ||
+ | [[Category: King A]] | ||
+ | [[Category: McGuire R]] | ||
+ | [[Category: Nimz O]] | ||
+ | [[Category: Skene R]] | ||
+ | [[Category: Uitdehaag JCM]] | ||
+ | [[Category: Vu D]] | ||
+ | [[Category: Wijnands R]] |
Current revision
X-ray structure of benzisoxazole synthetic agonist bound to the LXR-alpha
|
Categories: Homo sapiens | Large Structures | Bennet DJ | Cooke AJ | Fradera X | Haunso A | Hosfield D | King A | McGuire R | Nimz O | Skene R | Uitdehaag JCM | Vu D | Wijnands R