3ig2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:17, 30 October 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ig2.jpg|left|200px]]
 
-
<!--
+
==The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A==
-
The line below this paragraph, containing "STRUCTURE_3ig2", creates the "Structure Box" on the page.
+
<StructureSection load='3ig2' size='340' side='right'caption='[[3ig2]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ig2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IG2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IG2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3ig2| PDB=3ig2 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ig2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ig2 OCA], [https://pdbe.org/3ig2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ig2 RCSB], [https://www.ebi.ac.uk/pdbsum/3ig2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ig2 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SYFB_BACFN SYFB_BACFN]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ig/3ig2_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ig2 ConSurf].
 +
<div style="clear:both"></div>
-
===The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A===
+
==See Also==
-
 
+
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3IG2 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IG2 OCA].
+
[[Category: Bacteroides fragilis]]
[[Category: Bacteroides fragilis]]
-
[[Category: Phenylalanine--tRNA ligase]]
+
[[Category: Large Structures]]
-
[[Category: Hendricks, R.]]
+
[[Category: Hendricks R]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: Keigher, L.]]
+
[[Category: Keigher L]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Sather A]]
-
[[Category: Sather, A.]]
+
[[Category: Stein AJ]]
-
[[Category: Stein, A J.]]
+
-
[[Category: Aminoacyl-trna synthetase]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Bacteroide]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Fragili]]
+
-
[[Category: Ligase]]
+
-
[[Category: Magnesium]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Phenylalanyl-trna]]
+
-
[[Category: Pher]]
+
-
[[Category: Protein biosynthesis]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Rna-binding]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Synthetase]]
+
-
[[Category: Trna-binding]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Sep 3 16:15:39 2009''
+

Current revision

The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A

PDB ID 3ig2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ig2"
Personal tools