3eiv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:04, 30 August 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3eiv.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of Single-stranded DNA-binding protein from Streptomyces coelicolor==
-
The line below this paragraph, containing "STRUCTURE_3eiv", creates the "Structure Box" on the page.
+
<StructureSection load='3eiv' size='340' side='right'caption='[[3eiv]], [[Resolution|resolution]] 2.14&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3eiv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EIV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EIV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.141&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eiv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eiv OCA], [https://pdbe.org/3eiv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eiv RCSB], [https://www.ebi.ac.uk/pdbsum/3eiv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eiv ProSAT]</span></td></tr>
-
{{STRUCTURE_3eiv| PDB=3eiv | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SSB2_STRCO SSB2_STRCO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ei/3eiv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eiv ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The crystal structure of the single-stranded DNA-binding protein (SSB) from Streptomyces coelicolor, a filamentous soil bacterium with a complex life cycle and a linear chromosome, has been solved and refined at 2.1 A resolution. The three-dimensional structure shows a common conserved central OB-fold that is found in all structurally determined SSB proteins. However, it shows variations in quaternary structure that have previously only been found in mycobacterial SSBs. The strand involved in the clamp mechanism characteristic of this type of quaternary structure leads to higher stability of the homotetramer. To the best of our knowledge, this is the first X-ray structure of an SSB protein from a member of the genus Streptomyces and it was predicted to be the most stable of the structurally characterized bacterial or human mitochondrial SSBs.
-
===Crystal Structure of Single-stranded DNA-binding protein from Streptomyces coelicolor===
+
Structure of the single-stranded DNA-binding protein from Streptomyces coelicolor.,Stefanic Z, Vujaklija D, Luic M Acta Crystallogr D Biol Crystallogr. 2009 Sep;65(Pt 9):974-9. Epub 2009, Aug 14. PMID:19690375<ref>PMID:19690375</ref>
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 3eiv" style="background-color:#fffaf0;"></div>
-
<!--
+
==See Also==
-
The line below this paragraph, {{ABSTRACT_PUBMED_19690375}}, adds the Publication Abstract to the page
+
*[[Single-stranded DNA-binding protein 3D structures|Single-stranded DNA-binding protein 3D structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 19690375 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_19690375}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
3EIV is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EIV OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:19690375</ref><references group="xtra"/>
+
[[Category: Streptomyces coelicolor]]
[[Category: Streptomyces coelicolor]]
-
[[Category: Luic, M.]]
+
[[Category: Luic M]]
-
[[Category: Stefanic, Z.]]
+
[[Category: Stefanic Z]]
-
[[Category: Vujaklija, D.]]
+
[[Category: Vujaklija D]]
-
[[Category: Dna binding protein]]
+
-
[[Category: Dna damage]]
+
-
[[Category: Dna repair]]
+
-
[[Category: Dna replication]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Single-stranded dna-binding protein]]
+
-
[[Category: Streptomyces coelicolor]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 9 09:25:23 2009''
+

Current revision

Crystal Structure of Single-stranded DNA-binding protein from Streptomyces coelicolor

PDB ID 3eiv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3eiv"
Personal tools