This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wzn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1wzn" size="450" color="white" frame="true" align="right" spinBox="true" caption="1wzn, resolution 1.90&Aring;" /> '''Crystal Structure of...)
Current revision (13:35, 13 March 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1wzn.gif|left|200px]]<br /><applet load="1wzn" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1wzn, resolution 1.90&Aring;" />
 
-
'''Crystal Structure of the SAM-dependent methyltransferase from Pyrococcus horikoshii OT3'''<br />
 
-
==About this Structure==
+
==Crystal Structure of the SAM-dependent methyltransferase from Pyrococcus horikoshii OT3==
-
1WZN is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii] with SO4, MG and SAH as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1WZN OCA].
+
<StructureSection load='1wzn' size='340' side='right'caption='[[1wzn]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
[[Category: Pyrococcus horikoshii]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1wzn]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WZN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WZN FirstGlance]. <br>
-
[[Category: Kunishima, N.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
[[Category: Mizutani, H.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wzn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wzn OCA], [https://pdbe.org/1wzn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wzn RCSB], [https://www.ebi.ac.uk/pdbsum/1wzn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wzn ProSAT], [https://www.topsan.org/Proteins/RSGI/1wzn TOPSAN]</span></td></tr>
-
[[Category: MG]]
+
</table>
-
[[Category: SAH]]
+
== Function ==
-
[[Category: SO4]]
+
[https://www.uniprot.org/uniprot/O59000_PYRHO O59000_PYRHO]
-
[[Category: riken structural genomics/proteomics initiative]]
+
== Evolutionary Conservation ==
-
[[Category: rsgi]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: sam-dependent methyltransferase]]
+
Check<jmol>
-
[[Category: structural genomics]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wz/1wzn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wzn ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 01:08:19 2007''
+
==See Also==
 +
*[[SAM-dependent methyltrasferase 3D structures|SAM-dependent methyltrasferase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pyrococcus horikoshii OT3]]
 +
[[Category: Kunishima N]]
 +
[[Category: Mizutani H]]

Current revision

Crystal Structure of the SAM-dependent methyltransferase from Pyrococcus horikoshii OT3

PDB ID 1wzn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools