This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3iv4
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:3iv4.jpg|left|200px]] | ||
| - | + | ==A putative oxidoreductase with a thioredoxin fold== | |
| - | + | <StructureSection load='3iv4' size='340' side='right'caption='[[3iv4]], [[Resolution|resolution]] 1.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3iv4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staan Staan]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IV4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IV4 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SA0696 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=158879 STAAN])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iv4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iv4 OCA], [https://pdbe.org/3iv4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iv4 RCSB], [https://www.ebi.ac.uk/pdbsum/3iv4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iv4 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iv/3iv4_consurf.spt"</scriptWhenChecked> | |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Cui, H | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Edwards, A | + | </jmolCheckbox> |
| - | [[Category: Fan, Y | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iv4 ConSurf]. |
| - | [[Category: Joachimiak, A | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: Ng, J | + | </StructureSection> |
| - | [[Category: Savchenko, A | + | [[Category: Large Structures]] |
| - | [[Category: Xu, X | + | [[Category: Staan]] |
| + | [[Category: Cui, H]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Fan, Y]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Ng, J]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Xu, X]] | ||
[[Category: Apc23140]] | [[Category: Apc23140]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
[[Category: Meticillin-resistant staphylococcus aureus]] | [[Category: Meticillin-resistant staphylococcus aureus]] | ||
| - | [[Category: Midwest center for structural genomic]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Thioredoxin fold]] | [[Category: Thioredoxin fold]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 16 09:15:05 2009'' | ||
Current revision
A putative oxidoreductase with a thioredoxin fold
| |||||||||||
