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3ggq

From Proteopedia

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{{Seed}}
 
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[[Image:3ggq.png|left|200px]]
 
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<!--
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==Dimerization of Hepatitis E Virus Capsid Protein E2s Domain is Essential for Virus-Host Interaction==
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The line below this paragraph, containing "STRUCTURE_3ggq", creates the "Structure Box" on the page.
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<StructureSection load='3ggq' size='340' side='right'caption='[[3ggq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3ggq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hepatitis_E_virus_(strain_Pakistan) Hepatitis E virus (strain Pakistan)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GGQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GGQ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene></td></tr>
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{{STRUCTURE_3ggq| PDB=3ggq | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ggq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ggq OCA], [https://pdbe.org/3ggq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ggq RCSB], [https://www.ebi.ac.uk/pdbsum/3ggq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ggq ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CAPSD_HEVPA CAPSD_HEVPA] Major viral capsid protein that encapsidates the viral genome. Binds to the 5' end of the genomic RNA (By similarity).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/3ggq_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ggq ConSurf].
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<div style="clear:both"></div>
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===Dimerization of Hepatitis E Virus Capsid Protein E2s Domain is Essential for Virus-Host Interaction===
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_19662165}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 19662165 is the PubMed ID number.
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[[Category: Du HL]]
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[[Category: Gu Y]]
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{{ABSTRACT_PUBMED_19662165}}
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[[Category: Hew CL]]
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[[Category: Li SW]]
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==About this Structure==
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[[Category: Seetharaman J]]
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3GGQ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Hepatitis_e_virus_genotype_1 Hepatitis e virus genotype 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GGQ OCA].
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[[Category: Shih JWK]]
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[[Category: Sivaraman J]]
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==Reference==
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[[Category: Tang XH]]
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<ref group="xtra">PMID:19662165</ref><references group="xtra"/>
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[[Category: Xia NS]]
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[[Category: Hepatitis e virus genotype 1]]
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[[Category: Yang CY]]
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[[Category: Du, H L.]]
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[[Category: Zhang J]]
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[[Category: Gu, Y.]]
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[[Category: Hew, C L.]]
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[[Category: Li, S W.]]
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[[Category: Seetharaman, J.]]
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[[Category: Shih, J W.K.]]
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[[Category: Sivaraman, J.]]
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[[Category: Tang, X H.]]
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[[Category: Xia, N S.]]
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[[Category: Yang, C Y.]]
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[[Category: Zhang, J.]]
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[[Category: Beta barrel]]
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[[Category: Capsid protein]]
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[[Category: Cytoplasm]]
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[[Category: Rna-binding]]
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[[Category: Virion]]
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[[Category: Virus]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 21 19:26:09 2009''
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Current revision

Dimerization of Hepatitis E Virus Capsid Protein E2s Domain is Essential for Virus-Host Interaction

PDB ID 3ggq

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