User:Amy Kerzmann/Sandbox 2

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(Voltage-gated Potassium Channel)
(Voltage-gated Potassium Channel)
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== Voltage-gated Potassium Channel ==
== Voltage-gated Potassium Channel ==
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{{STRUCTURE_3cs9| PDB=1bl8 | SCENE=User:Amy_Kerzmann/Sandbox_2/Potassium_ions/4}}
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{{STRUCTURE_1bl8| PDB=1bl8 | SCENE=User:Amy_Kerzmann/Sandbox_2/Potassium_ions/4}}
'''Backgound'''
'''Backgound'''
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Revision as of 21:15, 24 September 2009

Voltage-gated Potassium Channel

PDB ID 1bl8

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1bl8, resolution 3.20Å ()
Ligands:
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Backgound


This crystal structure illuminated the principles of ion selectivity when it was solved in 1998.[1] To further demonstrate the importance of this structure, the 2003 Nobel Prize in Chemistry was awarded to the principal investigator, Roderick MacKinnon.


Channel Structure:


The potassium channel is a homotetramer, meaning that it is comprised of four identical .


The central core of this protein is comprised of eight helices, two from each monomeric subunit. Since each has the same orientation in the membrane, the protein has a four-fold rotational symmetry when viewed from the membrane surface. As a result, each of the channel-lining residues appears as a ring of four identical sidechains. This principle is represented by the conserved residues that function as selectivity filters within the cavity. Additional and residues line the channel. Looking at a of these residues, one can see that some hydrophobic patches remain within the cavity.

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Channel Function:


Here's how it works.


References


  1. Doyle DA, Morais Cabral J, Pfuetzner RA, Kuo A, Gulbis JM, Cohen SL, Chait BT, MacKinnon R. The structure of the potassium channel: molecular basis of K+ conduction and selectivity. Science. 1998 Apr 3;280(5360):69-77. PMID:9525859

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Amy Kerzmann, Jaime Prilusky

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