1u04

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(New page: 200px<br /><applet load="1u04" size="450" color="white" frame="true" align="right" spinBox="true" caption="1u04, resolution 2.25&Aring;" /> '''Crystal structure of...)
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[[Image:1u04.gif|left|200px]]<br /><applet load="1u04" size="450" color="white" frame="true" align="right" spinBox="true"
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[[Image:1u04.gif|left|200px]]<br /><applet load="1u04" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1u04, resolution 2.25&Aring;" />
caption="1u04, resolution 2.25&Aring;" />
'''Crystal structure of full length Argonaute from Pyrococcus furiosus'''<br />
'''Crystal structure of full length Argonaute from Pyrococcus furiosus'''<br />
==Overview==
==Overview==
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Argonaute proteins and small interfering RNAs (siRNAs) are the known, signature components of the RNA interference effector complex RNA-induced, silencing complex (RISC). However, the identity of "Slicer," the enzyme, that cleaves the messenger RNA (mRNA) as directed by the siRNA, has not, been resolved. Here, we report the crystal structure of the Argonaute, protein from Pyrococcus furiosus at 2.25 angstrom resolution. The, structure reveals a crescent-shaped base made up of the amino-terminal, middle, and PIWI domains. The Piwi Argonaute Zwille (PAZ) domain is held, above the base by a "stalk"-like region. The PIWI domain (named for the, protein piwi) is similar to ribonuclease H, with a conserved active site, aspartate-aspartate-glutamate motif, strongly implicating Argonaute as, "Slicer." The architecture of the molecule and the placement of the PAZ, and PIWI domains define a groove for substrate binding and suggest a, mechanism for siRNA-guided mRNA cleavage.
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Argonaute proteins and small interfering RNAs (siRNAs) are the known signature components of the RNA interference effector complex RNA-induced silencing complex (RISC). However, the identity of "Slicer," the enzyme that cleaves the messenger RNA (mRNA) as directed by the siRNA, has not been resolved. Here, we report the crystal structure of the Argonaute protein from Pyrococcus furiosus at 2.25 angstrom resolution. The structure reveals a crescent-shaped base made up of the amino-terminal, middle, and PIWI domains. The Piwi Argonaute Zwille (PAZ) domain is held above the base by a "stalk"-like region. The PIWI domain (named for the protein piwi) is similar to ribonuclease H, with a conserved active site aspartate-aspartate-glutamate motif, strongly implicating Argonaute as "Slicer." The architecture of the molecule and the placement of the PAZ and PIWI domains define a groove for substrate binding and suggest a mechanism for siRNA-guided mRNA cleavage.
==About this Structure==
==About this Structure==
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1U04 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1U04 OCA].
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1U04 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U04 OCA].
==Reference==
==Reference==
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[[Category: Pyrococcus furiosus dsm 3638]]
[[Category: Pyrococcus furiosus dsm 3638]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: Hannon, G.J.]]
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[[Category: Hannon, G J.]]
[[Category: Joshua-Tor, L.]]
[[Category: Joshua-Tor, L.]]
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[[Category: Smith, S.K.]]
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[[Category: Smith, S K.]]
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[[Category: Song, J.J.]]
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[[Category: Song, J J.]]
[[Category: argonaute]]
[[Category: argonaute]]
[[Category: paz]]
[[Category: paz]]
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[[Category: slicer]]
[[Category: slicer]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 03:03:45 2007''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:19:10 2008''

Revision as of 13:19, 21 February 2008

Image:1u04.gif

1u04, resolution 2.25Å

Drag the structure with the mouse to rotate

Crystal structure of full length Argonaute from Pyrococcus furiosus

Overview

Argonaute proteins and small interfering RNAs (siRNAs) are the known signature components of the RNA interference effector complex RNA-induced silencing complex (RISC). However, the identity of "Slicer," the enzyme that cleaves the messenger RNA (mRNA) as directed by the siRNA, has not been resolved. Here, we report the crystal structure of the Argonaute protein from Pyrococcus furiosus at 2.25 angstrom resolution. The structure reveals a crescent-shaped base made up of the amino-terminal, middle, and PIWI domains. The Piwi Argonaute Zwille (PAZ) domain is held above the base by a "stalk"-like region. The PIWI domain (named for the protein piwi) is similar to ribonuclease H, with a conserved active site aspartate-aspartate-glutamate motif, strongly implicating Argonaute as "Slicer." The architecture of the molecule and the placement of the PAZ and PIWI domains define a groove for substrate binding and suggest a mechanism for siRNA-guided mRNA cleavage.

About this Structure

1U04 is a Single protein structure of sequence from Pyrococcus furiosus dsm 3638. Full crystallographic information is available from OCA.

Reference

Crystal structure of Argonaute and its implications for RISC slicer activity., Song JJ, Smith SK, Hannon GJ, Joshua-Tor L, Science. 2004 Sep 3;305(5689):1434-7. Epub 2004 Jul 29. PMID:15284453

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