This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 3fsr
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3fsr]], [[Resolution|resolution]] 2.20Å (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3fsr]], [[Resolution|resolution]] 2.20Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Zn+A+353'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Zn+A+354'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Edo+A+355'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Edo+A+356'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Zn+B+353'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Zn+C+353'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Edo+C+354'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Zn+C+355'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Zn+D+353'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Edo+D+354'>BC1</scene> and <scene name='pdbsite=BC2:Binding+Site+For+Residue+Cl+D+355'>BC2</scene> | ||
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | |LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Alcohol_dehydrogenase_(NADP(+)) Alcohol dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.2 1.1.1.2] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Alcohol_dehydrogenase_(NADP(+)) Alcohol dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.2 1.1.1.2] </span> | ||
| Line 8: | Line 7: | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fsr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fsr OCA], [http://www.ebi.ac.uk/pdbsum/3fsr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3fsr RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fsr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fsr OCA], [http://www.ebi.ac.uk/pdbsum/3fsr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3fsr RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013149 Ipr013149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002328 Ipr002328], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002085 Ipr002085], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013154 Ipr013154], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011032 Ipr011032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016040 Ipr016040]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00107 PF00107], [http://pfam.sanger.ac.uk/family?acc=PF08240 PF08240]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013149 Ipr013149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002328 Ipr002328], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002085 Ipr002085], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013154 Ipr013154], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011032 Ipr011032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016040 Ipr016040]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00107 PF00107], [http://pfam.sanger.ac.uk/family?acc=PF08240 PF08240]</span> | ||
| + | |uPDB=3FSR|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_3fsr_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_3fsr_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_3fsr_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_3fsr_D</name> | ||
| + | <title>toggle chain D</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 10:39, 13 June 2012
| |||||||||
| 3fsr, resolution 2.20Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , , | ||||||||
| Gene: | ADH1,ADH1 (Thermoanaerobacter brockii, Clostridium beijerinckii) | ||||||||
| Activity: | Alcohol dehydrogenase (NADP(+)), with EC number 1.1.1.2 | ||||||||
| Related: | 3fpc, 3fpl | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

