1e98
From Proteopedia
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| - | [[Image:1e98.jpg|left|200px]]<br /><applet load="1e98" size=" | + | [[Image:1e98.jpg|left|200px]]<br /><applet load="1e98" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1e98, resolution 1.9Å" /> | caption="1e98, resolution 1.9Å" /> | ||
'''WILD TYPE HUMAN THYMIDYLATE KINASE COMPLEXED WITH AZTMP AND ADP'''<br /> | '''WILD TYPE HUMAN THYMIDYLATE KINASE COMPLEXED WITH AZTMP AND ADP'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1E98 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with MG, ADP and ATM as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/dTMP_kinase dTMP kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.9 2.7.4.9] Known structural/functional Site: <scene name='pdbsite=ADP:Atm Binding Site For Chain A Residue 301'>ADP</scene>. Full crystallographic information is available from [http:// | + | 1E98 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=MG:'>MG</scene>, <scene name='pdbligand=ADP:'>ADP</scene> and <scene name='pdbligand=ATM:'>ATM</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/dTMP_kinase dTMP kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.9 2.7.4.9] Known structural/functional Site: <scene name='pdbsite=ADP:Atm+Binding+Site+For+Chain+A+Residue+301'>ADP</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E98 OCA]. |
==Reference== | ==Reference== | ||
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[[Category: thymidylate kinase]] | [[Category: thymidylate kinase]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 09:38:23 2008'' |
Revision as of 07:38, 3 February 2008
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WILD TYPE HUMAN THYMIDYLATE KINASE COMPLEXED WITH AZTMP AND ADP
Overview
The 60-fold reduced phosphorylation rate of azidothymidine (AZT), monophosphate (AZTMP), the partially activated AZT metabolite, by human, thymidylate kinase (TMPK) severely limits the efficacy of this anti-HIV, prodrug. Crystal structures of different TMPK nucleotide complexes, indicate that steric hindrance by the azido group of AZTMP prevents, formation of the catalytically active closed conformation of the P-loop of, TMPK. The F105Y mutant and a chimeric mutant that contains sequences of, the human and Escherichia coli enzyme phosphorylate AZTMP 20-fold faster, than the wild-type enzyme. The structural basis of the increased activity, is assigned to stabilization of the closed P-loop conformation.
About this Structure
1E98 is a Single protein structure of sequence from Homo sapiens with , and as ligands. Active as dTMP kinase, with EC number 2.7.4.9 Known structural/functional Site: . Full crystallographic information is available from OCA.
Reference
Potentiating AZT activation: structures of wild-type and mutant human thymidylate kinase suggest reasons for the mutants' improved kinetics with the HIV prodrug metabolite AZTMP., Ostermann N, Lavie A, Padiyar S, Brundiers R, Veit T, Reinstein J, Goody RS, Konrad M, Schlichting I, J Mol Biol. 2000 Nov 17;304(1):43-53. PMID:11071809
Page seeded by OCA on Sun Feb 3 09:38:23 2008
Categories: Homo sapiens | Single protein | DTMP kinase | Brundiers, R. | Goody, R.S. | Konrad, M. | Lavie, A. | Ostermann, N. | Padiyar, S. | Reintein, J. | Schlichting, I. | Veit, T. | ADP | ATM | MG | P-loop | Thymidylate kinase
