1eb8
From Proteopedia
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| - | [[Image:1eb8.jpg|left|200px]]<br /><applet load="1eb8" size=" | + | [[Image:1eb8.jpg|left|200px]]<br /><applet load="1eb8" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1eb8, resolution 2.10Å" /> | caption="1eb8, resolution 2.10Å" /> | ||
'''STRUCTURE DETERMINANTS OF SUBSTRATE SPECIFICITY OF HYDROXYNITRILE LYASE FROM MANIHOT ESCULENTA'''<br /> | '''STRUCTURE DETERMINANTS OF SUBSTRATE SPECIFICITY OF HYDROXYNITRILE LYASE FROM MANIHOT ESCULENTA'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1EB8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Manihot_esculenta Manihot esculenta] with MPD as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Transferred_entry:_3.3.2.4 Transferred entry: 3.3.2.4], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.37 4.2.1.37] Known structural/functional Site: <scene name='pdbsite=ASA:Residues Involved In Catalysis Site For Chain B'>ASA</scene>. Full crystallographic information is available from [http:// | + | 1EB8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Manihot_esculenta Manihot esculenta] with <scene name='pdbligand=MPD:'>MPD</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Transferred_entry:_3.3.2.4 Transferred entry: 3.3.2.4], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.37 4.2.1.37] Known structural/functional Site: <scene name='pdbsite=ASA:Residues+Involved+In+Catalysis+Site+For+Chain+B'>ASA</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EB8 OCA]. |
==Reference== | ==Reference== | ||
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[[Category: substrate specificity]] | [[Category: substrate specificity]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 09:38:59 2008'' |
Revision as of 07:38, 3 February 2008
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STRUCTURE DETERMINANTS OF SUBSTRATE SPECIFICITY OF HYDROXYNITRILE LYASE FROM MANIHOT ESCULENTA
Overview
Tryptophan 128 of hydroxynitrile lyase of Manihot esculenta (MeHNL) covers, a significant part of a hydrophobic channel that gives access to the, active site of the enzyme. This residue was therefore substituted in the, mutant MeHNL-W128A by alanine to study its importance for the substrate, specificity of the enzyme. Wild-type MeHNL and MeHNL-W128A showed, comparable activity on the natural substrate acetone cyanohydrin (53 and, 40 U/mg, respectively). However, the specific activities of MeHNL-W128A, for the unnatural substrates mandelonitrile and 4-hydroxymandelonitrile, are increased 9-fold and approximately 450-fold, respectively, compared, with the wild-type MeHNL. The crystal structure of the MeHNL-W128A, substrate-free form at 2.1 A resolution indicates that the W128A, substitution has significantly enlarged the active-site channel entrance, and thereby explains the observed changes in substrate specificity for, bulky substrates. Surprisingly, the MeHNL-W128A--4-hydroxybenzaldehyde, complex structure at 2.1 A resolution shows the presence of two, hydroxybenzaldehyde molecules in a sandwich type arrangement in the active, site with an additional hydrogen bridge to the reacting center.
About this Structure
1EB8 is a Single protein structure of sequence from Manihot esculenta with as ligand. Active as Transferred entry: 3.3.2.4, with EC number 4.2.1.37 Known structural/functional Site: . Full crystallographic information is available from OCA.
Reference
Structure determinants of substrate specificity of hydroxynitrile lyase from Manihot esculenta., Lauble H, Miehlich B, Forster S, Kobler C, Wajant H, Effenberger F, Protein Sci. 2002 Jan;11(1):65-71. PMID:11742123
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