Alignment of 1rpu vs 1r9f

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From: [http://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastp&BLAST_PROGRAMS=blastp&PAGE_TYPE=BlastSearch&SHOW_DEFAULTS=on&BLAST_SPEC=blast2seq&LINK_LOC=blasttab&LAST_PAGE=blastn&BLAST_INIT=blast2seq&QUERY=%3E1rpu%3AA%0ANDTREQANGERWDGGSGGITSPFKLPDESPSWTEWRLYNDENPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRFLGANQVGCTYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQLTPVEV&SUBJECTS=%3E1r9f%3AA%0AHMTSPFKLPDESPSWTEWRLHNDETQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRFFGFDQIGCTYSIRFRGVSITVSGGSRTLQHLCEMAIRSKQEMLQMA protein-protein BLAST]<br>
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>lcl|50431 1r9f:A
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Length=121<br>
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Length=121
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Score = 226 bits (576)
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Expect = 1e-64
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Method: Compositional matrix adjust.<br>
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Identities = 106/119 (89%)
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Positives = 114/119 (95%)
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Gaps = 3/119 (2%)
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Score = 226 bits (576), Expect = 1e-64, Method: Compositional matrix adjust.
 
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Identities = 106/119 (89%), Positives = 114/119 (95%), Gaps = 3/119 (2%)
 
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Revision as of 02:13, 16 May 2010

From: protein-protein BLAST
Length=121
Score = 226 bits (576) Expect = 1e-64 Method: Compositional matrix adjust.
Identities = 106/119 (89%) Positives = 114/119 (95%) Gaps = 3/119 (2%)


1rpu 19 ITSPFKLPDESPSWTEWRLYNDE---NPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLG 75
        +TSPFKLPDESPSWTEWRL+NDE NPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLG
1r9f 2  MTSPFKLPDESPSWTEWRLHNDETQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLG 61

1rpu 76 SWTGDSVNYAASRFLGANQVGCTYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQL 134
        SWTGDSVNYAASRF G +Q+GCTYSIRFRGVS+T+SGGSRTLQHLCEMAIRSKQE+LQ+
1rpf 62 SWTGDSVNYAASRFFGFDQIGCTYSIRFRGVSITVSGGSRTLQHLCEMAIRSKQEMLQM 120

Proteopedia Page Contributors and Editors (what is this?)

Wayne Decatur

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