2ch8
From Proteopedia
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| - | [[Image:2ch8.gif|left|200px]]<br /><applet load="2ch8" size=" | + | [[Image:2ch8.gif|left|200px]]<br /><applet load="2ch8" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="2ch8, resolution 2.30Å" /> | caption="2ch8, resolution 2.30Å" /> | ||
'''STRUCTURE OF THE EPSTEIN-BARR VIRUS ONCOGENE BARF1'''<br /> | '''STRUCTURE OF THE EPSTEIN-BARR VIRUS ONCOGENE BARF1'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
| - | 2CH8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Human_herpesvirus_4 Human herpesvirus 4] with MAN and PT as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Site: <scene name='pdbsite=AC1:Nag Binding Site For Chain D'>AC1</scene>. Full crystallographic information is available from [http:// | + | 2CH8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Human_herpesvirus_4 Human herpesvirus 4] with <scene name='pdbligand=MAN:'>MAN</scene> and <scene name='pdbligand=PT:'>PT</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Site: <scene name='pdbsite=AC1:Nag+Binding+Site+For+Chain+D'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CH8 OCA]. |
==Reference== | ==Reference== | ||
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[[Category: viral protein]] | [[Category: viral protein]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 10:35:17 2008'' |
Revision as of 08:35, 3 February 2008
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STRUCTURE OF THE EPSTEIN-BARR VIRUS ONCOGENE BARF1
Overview
The Epstein-Barr virus is a human gamma-herpesvirus that persistently, infects more than 90% of the human population. It is associated with, numerous epithelial cancers, principally undifferentiated nasopharyngeal, carcinoma and gastric carcinoma. The BARF1 gene is expressed in a high, proportion of these cancers. An oncogenic, mitogenic and immortalizing, activity of the BARF1 protein has been shown. We solved the structure of, the secreted BARF1 glycoprotein expressed in a human cell line by X-ray, crystallography at a resolution of 2.3A. The BARF1 protein consists of two, immunoglobulin (Ig)-like domains. The N-terminal domain belongs to the, subfamily of variable domains whereas the C-terminal one is related to a, constant Ig-domain. BARF1 shows an unusual hexamerisation involving two, principal contacts, one between the C-terminal domains and one between the, N-terminal domains. The C-terminal contact with an uncommonly large, contact surface extends the beta-sandwich of the Ig-domain through the, second molecule. The N-terminal contact involves Ig-domains with an, unusual relative orientation but with a more classical contact surface, with a size in the range of dimer interactions of Ig-domains. The, structure of BARF1 is most closely related to CD80 or B7-1, a, co-stimulatory molecule present on antigen presenting cells, from which, BARF1 must have been derived during evolution. Still, domain orientation, and oligomerization differ between BARF1 and CD80. It had been shown that, BARF1 binds to hCSF-1, the human colony-stimulating factor 1, but this, interaction has to be principally different from the one between CSF-1 and, CSF-1 receptor.
About this Structure
2CH8 is a Single protein structure of sequence from Human herpesvirus 4 with and as ligands. Known structural/functional Site: . Full crystallographic information is available from OCA.
Reference
Structure of the Epstein-Barr virus oncogene BARF1., Tarbouriech N, Ruggiero F, de Turenne-Tessier M, Ooka T, Burmeister WP, J Mol Biol. 2006 Jun 9;359(3):667-78. Epub 2006 Apr 18. PMID:16647084
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